RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 HOGA1Q86XE5 327 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 TGIF2LYQ8IUE0 185 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 C11orf53Q8IXP5 236 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 C1orf174Q8IYL3 243 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 SLC25A45Q8N413 288 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 THAP8Q8NA92 274 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 OR4C16Q8NGL9 310 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 RTN4IP1Q8WWV3 396 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 TMEM125Q96AQ2 219 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 MS4A6EQ96DS6 147 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 PGLYRP3Q96LB9 341 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 SCGB3A2Q96PL1 93 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 MRPL45Q9BRJ2 306 aaKnown RBP3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 RTBDNQ9BSG5 229 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 EDA2RQ9HAV5 297 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 TXNL4BQ9NX01 149 aaKnown RBP3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 OR5V1Q9UGF6 321 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 OR1A2Q9Y585 309 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 MPC1Q9Y5U8 109 aa3.85□□□□□ -1.79
HMGB3P9-201ENST00000441799 NUP210LQ5VU65 1888 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 ATG2AQ2TAZ0 1938 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 TRAV8-6A0A0B4J262 113 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 TCRBV9S1A1TA0A576 114 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 MYBPHLA2RUH7 354 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 SRRM4A7MD48 611 aaKnown RBP3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 C2CD4DB7Z1M9 353 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 F8W1H4 67 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 LY6LH3BQJ8 138 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 IL5P05113 134 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 GPX3P22352 226 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 DUTP33316 252 aaKnown RBP3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 ARL2P36404 184 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 GALR1P47211 349 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 INPP1P49441 399 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 UBE2E1P51965 193 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 RND3P61587 244 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 SEC11AP67812 179 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 RPL18AQ02543 176 aaKnown RBP3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 LTBQ06643 244 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 LOXL1Q08397 574 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 DIAPH2-AS1Q14236 149 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 ZNF141Q15928 474 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 C2orf68Q2NKX9 166 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 PAGE3Q5JUK9 113 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 LCN15Q6UWW0 184 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 AMTNQ6UX39 209 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 ZNF534Q76KX8 674 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 GAPTQ8N292 157 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 EXOC3-AS1Q8N2X6 119 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 KLHDC9Q8NEP7 349 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 ZNF555Q8NEP9 628 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 NUP35Q8NFH5 326 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 OR4F17Q8NGA8 305 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 OR5D14Q8NGL3 314 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 OR10D3Q8NH80 312 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 RTP4Q96DX8 246 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 UBE2E2Q96LR5 201 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 OR4F4Q96R69 305 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 PRRG4Q9BZD6 226 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 WDR13Q9H1Z4 485 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 TCEAL2Q9H3H9 227 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 ST20Q9HBF5 79 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 PNRC2Q9NPJ4 139 aaKnown RBP3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 PARP11Q9NR21 331 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 MARCOQ9UEW3 520 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 PAM16Q9Y3D7 125 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 HEBP2Q9Y5Z4 205 aa3.84□□□□□ -1.79
HMGB3P9-201ENST00000441799 WDFY4Q6ZS81 3184 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 C5orf63A6NC05 138 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 LINC01548A6NM66 108 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 TMEM262E9PQX1 116 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 TMEM250H0YL14 139 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 H3BRM9 83 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 SPINT2O43291 252 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 LMX1BO60663 402 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 PGLYRP1O75594 196 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 DPM2O94777 84 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 CXorf1O96002 111 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 CA2P00918 260 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 IGHG1P01857 330 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 HLA-DRB1P01911 266 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 H1F0P07305 194 aaKnown RBP3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 CXCL1P09341 107 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 PGA4P0DJD7 388 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 PGA5P0DJD9 388 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 P0DMU3 169 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 FAM231AP0DMU4 169 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 FAM231CP0DMU5 169 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 SLC25A4P12235 298 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 CPMP14384 443 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 MYOD1P15172 320 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 SDC2P34741 201 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 BTCP35070 178 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 POLR2JP52435 117 aaKnown RBP3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 RBM11P57052 281 aaKnown RBP3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 FBXW4P57775 412 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 TAS2R19P59542 299 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 SLC25A11Q02978 314 aaKnown RBP3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 ADIRFQ15847 76 aa3.83□□□□□ -1.8
HMGB3P9-201ENST00000441799 TECRLQ5HYJ1 363 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms