RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 ANKRD55Q3KP44 614 aa13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 C12orf54Q6X4T0 127 aa13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 HSD17B13Q7Z5P4 300 aaPredicted RBP13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 COMMD1Q8N668 190 aa13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 MINDY2Q8NBR6 621 aa13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 SGMS2Q8NHU3 365 aa13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 MITD1Q8WV92 249 aa13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 SRSF12Q8WXF0 261 aaKnown RBP13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 ANK3Q12955 4377 aaKnown RBP13.06□□□□□ -0.32
CTDSPL-204ENST00000435525 PSMB11A5LHX3 300 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 MSGN1A6NI15 193 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 C15orf61A6NNL5 157 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 IL6RP08887 468 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 TRAPPC2P0DI81 140 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 TRAPPC2BP0DI82 140 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 SULT1A3P0DMM9 295 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 SULT1A4P0DMN0 295 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 ECSCRQ19T08 205 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 AKIRIN2Q53H80 203 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 AWAT1Q58HT5 328 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 UNQ5815/PRO19632Q6UWF5 114 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 Q6ZS46 218 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 LYZL2Q7Z4W2 148 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 C12orf45Q8N5I9 185 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 KLHDC1Q8N7A1 406 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 UXS1Q8NBZ7 420 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 OR4X2Q8NGF9 303 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 LHFPL5Q8TAF8 219 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 FYTTD1Q96QD9 318 aaKnown RBP13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 SRSF8Q9BRL6 282 aaKnown RBP13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 QTRT1Q9BXR0 403 aaKnown RBP13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 ENY2Q9NPA8 101 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 SERTAD4Q9NUC0 356 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 FOXA2Q9Y261 457 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 ZNF257Q9Y2Q1 563 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 NF1P21359 2839 aa13.05□□□□□ -0.32
CTDSPL-204ENST00000435525 A0A1B0GU03 582 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 CYB5BO43169 146 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 IFNA17P01571 189 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 HOXB5P09067 269 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 CRIP2P52943 208 aaPredicted RBP13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 OR2B8PP59922 312 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 TMEM95Q3KNT9 176 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 ZNF429Q86V71 674 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 SEC22CQ9BRL7 303 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 HINT2Q9BX68 163 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 TMEM14BQ9NUH8 114 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 COA4Q9NYJ1 87 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 PRR13Q9NZ81 148 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 CACNG5Q9UF02 275 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 NSG2Q9Y328 171 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 WSB1Q9Y6I7 421 aa13.04□□□□□ -0.32
CTDSPL-204ENST00000435525 TRAV3A0A0B4J244 114 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 A0A1W2PN81 502 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 SLC25A6P12236 298 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 CHRNA7P36544 502 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 HSPE1P61604 102 aaKnown RBP13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 SMCO1Q147U7 214 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 KRTAP21-3Q3LHN1 58 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 TEX38Q6PEX7 206 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 TMEM65Q6PI78 240 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 C3orf56Q8N813 242 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 LFNGQ8NES3 379 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 OR52B4Q8NGK2 314 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 OR5M8Q8NGP6 311 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 OR1S1Q8NH92 325 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 TAF15Q92804 592 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 GPR146Q96CH1 333 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 NOL4LQ96MY1 436 aaPredicted RBP13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 FAM103A1Q9BTL3 118 aaKnown RBP13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 WNT10AQ9GZT5 417 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 LINC00527Q9UJ94 153 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 C2CD3Q4AC94 2353 aa13.03□□□□□ -0.32
CTDSPL-204ENST00000435525 SVEP1Q4LDE5 3571 aa13.02□□□□□ -0.32
CTDSPL-204ENST00000435525 TEX50A0A1B0GTY4 177 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 LINC01548A6NM66 108 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 OPN1MWP04001 364 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 P0C879 139 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 OPN1MW2P0DN77 364 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 OPN1MW3P0DN78 364 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 PROK1P58294 105 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 NDPQ00604 133 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 GGNBP1Q5YKI7 109 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 OR5AU1Q8NGC0 362 aa13.02□□□□□ -0.33
CTDSPL-204ENST00000435525 A0A0B4J293 547 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 SSNA1O43805 119 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 ELANEP08246 267 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 SPNP16150 400 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 SPCS3P61009 180 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 ERHP84090 104 aaKnown RBP13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 MRGPRG-AS1Q2M3A8 158 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 NMSQ5H8A3 153 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 CXorf66Q5JRM2 361 aaPredicted RBP13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 C10orf55Q5SWW7 151 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 OR52E5Q8NH55 327 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 PLEKHA3Q9HB20 300 aa13.01□□□□□ -0.33
CTDSPL-204ENST00000435525 ZNF355PQ9NSJ1 428 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms