RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SPG11Q96JI7 2443 aa14.28□□□□□ -0.12
SMARCA4-203ENST00000429416 PRSS3P2Q8NHM4 247 aa14.28□□□□□ -0.12
SMARCA4-203ENST00000429416 TP53RKQ96S44 253 aa14.28□□□□□ -0.12
SMARCA4-203ENST00000429416 RBFOX3A6NFN3 312 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 PRR32B1ATL7 298 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 H3BUX3 64 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 MELTFP08582 738 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 MMP26Q9NRE1 261 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 FANCMQ8IYD8 2048 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 HSBP1O75506 76 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 DMRTA2Q96SC8 542 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 CLDN16Q9Y5I7 305 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 GBF1Q92538 1859 aa14.27□□□□□ -0.12
SMARCA4-203ENST00000429416 OR2T8A6NH00 312 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 RGS13O14921 159 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 OR11H7Q8NGC8 314 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 SRD5A3Q9H8P0 318 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 ANAPC1Q9H1A4 1944 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 CA2P00918 260 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 DLX6P56179 175 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 HLA-DRB5Q30154 266 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 SLC35B3Q9H1N7 401 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 OR5AC2Q9NZP5 309 aa14.27□□□□□ -0.13
SMARCA4-203ENST00000429416 ABCA1O95477 2261 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 PGPA6NDG6 321 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 AURKAIP1Q9NWT8 199 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 TRAV24A0A0B4J272 114 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 MPDU1O75352 247 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 NUTF2P61970 127 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 DNAJC4Q9NNZ3 241 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 PITX3O75364 302 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 HIST1H1AQ02539 215 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 LGALSLQ3ZCW2 172 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 FAM162BQ5T6X4 162 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 TMEM88Q6PEY1 159 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 SIGLECL1Q8N7X8 197 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 NOL4LQ96MY1 436 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 PTPN13Q12923 2485 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 FAM90A26D6RGX4 464 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 F12P00748 615 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 PEMTQ9UBM1 199 aa14.26□□□□□ -0.13
SMARCA4-203ENST00000429416 CSN3P07498 182 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 TUSC1Q2TAM9 212 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 H1FOOQ8IZA3 346 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 NOTCH3Q9UM47 2321 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 TRAV20A0A0B4J274 112 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 CFDP00746 253 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 UCP3P55916 312 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 WNT10AQ9GZT5 417 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 SHISA3A0PJX4 238 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 MORN2Q502X0 79 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 AP4M1O00189 453 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 ALX3O95076 343 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 GPX1P07203 203 aa14.25□□□□□ -0.13
SMARCA4-203ENST00000429416 LILRA1O75019 489 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 CEACAM8P31997 349 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 TMEM200BQ69YZ2 307 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 NXF2Q9GZY0 626 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 RPUSD1Q9UJJ7 312 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 ST6GAL2Q96JF0 529 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 TRAPPC1Q9Y5R8 145 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 IGHV2-26A0A0B4J1V2 119 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 YPEL1O60688 119 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 AMY1AP04745 511 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 OR10C1Q96KK4 312 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 YPEL2Q96QA6 119 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 NEURL2Q9BR09 285 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 DEDDO75618 318 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 SAA1P0DJI8 122 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 AMTP48728 403 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 RPS11P62280 158 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 OR51G1Q8NGK1 321 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 VAX2Q9UIW0 290 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 MFSD2BA6NFX1 497 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 RAB9AP51151 201 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 RNASEKQ6P5S7 137 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 PROK2Q9HC23 129 aa14.24□□□□□ -0.13
SMARCA4-203ENST00000429416 FCN1O00602 326 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 TCAPO15273 167 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 SIAH2O43255 324 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 WISP1O95388 367 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 FABP4P15090 132 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 CCL1P22362 96 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 HGFACQ04756 655 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 FAM215AQ9Y5M1 114 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 TNFSF13O75888 250 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 MMP9P14780 707 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 TSPOP30536 169 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 DEFB121Q5J5C9 76 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 ZNF497Q6ZNH5 498 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 OR2D3Q8NGH3 330 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 SRSF12Q8WXF0 261 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 EIF3GO75821 320 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 EGR1P18146 543 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 TMEM187Q14656 261 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 PHYHIPLQ96FC7 376 aa14.23□□□□□ -0.13
SMARCA4-203ENST00000429416 NDUFS8O00217 210 aa14.22□□□□□ -0.13
SMARCA4-203ENST00000429416 OR10G8Q8NGN5 311 aa14.22□□□□□ -0.13
SMARCA4-203ENST00000429416 IGFBP3P17936 291 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-203ENST00000429416 EMP1P54849 157 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms