RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 MTFP1Q9UDX5 166 aa6.8□□□□□ -1.32
LINC00963-204ENST00000427778 SCOCQ9UIL1 159 aa6.8□□□□□ -1.32
LINC00963-204ENST00000427778 ZNF257Q9Y2Q1 563 aa6.8□□□□□ -1.32
LINC00963-204ENST00000427778 IGHV4OR15-8A0A075B7B6 117 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 A0A087WW49 117 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 C13orf42A0A1B0GVH6 325 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 A0A1B0GW64 132 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 NPIPB5A8MRT5 1133 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 SEC14L6B5MCN3 397 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 H3BMQ9 156 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 GABARAPH6UMI1 98 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 K7EIL1 84 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 OVOL1O14753 267 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 PGLYRP1O75594 196 aaPredicted RBP6.79□□□□□ -1.32
LINC00963-204ENST00000427778 CD74P04233 296 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 CRYGCP07315 174 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 HLA-GP17693 338 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 ZP3P21754 424 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 HOXD3P31249 432 aaPredicted RBP6.79□□□□□ -1.32
LINC00963-204ENST00000427778 RPL27AP46776 148 aaKnown RBP6.79□□□□□ -1.32
LINC00963-204ENST00000427778 DGCR2P98153 550 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 DCTN2Q13561 401 aaKnown RBP6.79□□□□□ -1.32
LINC00963-204ENST00000427778 FAM209BQ5JX69 171 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 C10orf55Q5SWW7 151 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 AADACL3Q5VUY0 350 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 ZNF343Q6P1L6 599 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 ZNF429Q86V71 674 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 LHFPL1Q86WI0 220 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 LAX1Q8IWV1 398 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 NECAP1Q8NC96 275 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 OR51H1Q8NH63 302 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 OR52I2Q8NH67 350 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 DCUN1D4Q92564 292 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 ISOC1Q96CN7 298 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 DGCR14Q96DF8 476 aaKnown RBP6.79□□□□□ -1.32
LINC00963-204ENST00000427778 MS4A10Q96PG2 267 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 PHB2Q99623 299 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 SRSF8Q9BRL6 282 aaKnown RBP6.79□□□□□ -1.32
LINC00963-204ENST00000427778 SSBP4Q9BWG4 385 aaPredicted RBP6.79□□□□□ -1.32
LINC00963-204ENST00000427778 SLIRPQ9GZT3 109 aaKnown RBP6.79□□□□□ -1.32
LINC00963-204ENST00000427778 RANGRFQ9HD47 186 aaPredicted RBP6.79□□□□□ -1.32
LINC00963-204ENST00000427778 SLC2A9Q9NRM0 540 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 KLK11Q9UBX7 282 aa6.79□□□□□ -1.32
LINC00963-204ENST00000427778 DNAH1Q9P2D7 4330 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 WI2-2373I1.2A0A1W2PRP0 233 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 MARCH11A6NNE9 402 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 E7EUB6 86 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 UPK2O00526 184 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 CTDSP2O14595 271 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 CTDSPLO15194 276 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 MPPED1O15442 326 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 RGS5O15539 181 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 NOL3O60936 208 aaKnown RBP6.78□□□□□ -1.32
LINC00963-204ENST00000427778 RBMXL2O75526 392 aaKnown RBP6.78□□□□□ -1.32
LINC00963-204ENST00000427778 S1PR2O95136 353 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 IGHV3-11P01762 117 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 RLN1P04808 185 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 PTBP1P26599 531 aaKnown RBP eCLIP6.78□□□□□ -1.32
LINC00963-204ENST00000427778 S100GP29377 79 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 SLURP1P55000 103 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 OR2B8PP59922 312 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 RND3P61587 244 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 TSPAN5P62079 268 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 ZNF45Q02386 682 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 ZNF585BQ52M93 769 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 RNASE10Q5GAN6 216 aaKnown RBP6.78□□□□□ -1.32
LINC00963-204ENST00000427778 THOC7Q6I9Y2 204 aaKnown RBP6.78□□□□□ -1.32
LINC00963-204ENST00000427778 ACSM6Q6P461 480 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 SLC38A6Q8IZM9 456 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 SMIM4Q8WVI0 70 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 FCAMRQ8WWV6 532 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 DLX4Q92988 240 aaPredicted RBP6.78□□□□□ -1.32
LINC00963-204ENST00000427778 ZNF486Q96H40 463 aaPredicted RBP6.78□□□□□ -1.32
LINC00963-204ENST00000427778 NXF2Q9GZY0 626 aaKnown RBP6.78□□□□□ -1.32
LINC00963-204ENST00000427778 ZNF355PQ9NSJ1 428 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 TMEM140Q9NV12 185 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 COA4Q9NYJ1 87 aa6.78□□□□□ -1.32
LINC00963-204ENST00000427778 LYSTQ99698 3801 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 IGLC7A0M8Q6 106 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 CGB1A6NKQ9 187 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 CD3DP04234 171 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 APELAP0DMC3 54 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 CTRB1P17538 263 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 PSMB6P28072 239 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 TAS2R19P59542 299 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 RHOGP84095 191 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 KLF5Q13887 457 aaPredicted RBP6.77□□□□□ -1.33
LINC00963-204ENST00000427778 CTRB2Q6GPI1 263 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 SSX9Q7RTT3 188 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 HSD17B13Q7Z5P4 300 aaPredicted RBP6.77□□□□□ -1.33
LINC00963-204ENST00000427778 TMEM229BQ8NBD8 167 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 RBM38Q9H0Z9 239 aaKnown RBP6.77□□□□□ -1.33
LINC00963-204ENST00000427778 HRASLSQ9HDD0 168 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 AKIP1Q9NQ31 210 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 PEF1Q9UBV8 284 aaKnown RBP6.77□□□□□ -1.33
LINC00963-204ENST00000427778 CEPT1Q9Y6K0 416 aa6.77□□□□□ -1.33
LINC00963-204ENST00000427778 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.76□□□□□ -1.33
LINC00963-204ENST00000427778 HMX3A6NHT5 357 aa6.76□□□□□ -1.33
LINC00963-204ENST00000427778 M0QYG6 137 aa6.76□□□□□ -1.33
LINC00963-204ENST00000427778 ZNF701M0R085 212 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms