RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 FAM106AQ4KMX7 169 aa12.16□□□□□ -0.46
COL18A1-205ENST00000423214 ZNF57Q68EA5 555 aaPredicted RBP12.16□□□□□ -0.46
COL18A1-205ENST00000423214 ZNF66Q6ZN08 573 aa12.16□□□□□ -0.46
COL18A1-205ENST00000423214 MFSD4AQ8N468 514 aa12.16□□□□□ -0.46
COL18A1-205ENST00000423214 BEST4Q8NFU0 473 aa12.16□□□□□ -0.46
COL18A1-205ENST00000423214 A0A0A6YYH2 397 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 ZNF320A2RRD8 509 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 A6NJ64 397 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 A8MWP6 167 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 NDUFB8O95169 186 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 REG1AP05451 166 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 AREGP15514 252 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 CBLN1P23435 193 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 PSMB6P28072 239 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 OR4A47Q6IF82 309 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 HOGA1Q86XE5 327 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 GPHB5Q86YW7 130 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 CROCCP3Q8IVE0 287 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 TMEM61Q8N0U2 210 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 OR52B4Q8NGK2 314 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 SECTM1Q8WVN6 248 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 S100A16Q96FQ6 103 aaKnown RBP12.15□□□□□ -0.46
COL18A1-205ENST00000423214 GPHA2Q96T91 129 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 AIFM2Q9BRQ8 373 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 FUNDC2Q9BWH2 189 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 HRASLSQ9HDD0 168 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 DMRT1Q9Y5R6 373 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 SELENOKQ9Y6D0 94 aa12.15□□□□□ -0.46
COL18A1-205ENST00000423214 BIRC6Q9NR09 4857 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 TNFSF12O43508 249 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 CTRB1P17538 263 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 HLA-GP17693 338 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 FCGR2CP31995 323 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 VBP1P61758 197 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 NCS1P62166 190 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 EIF4EBP1Q13541 118 aaPredicted RBP12.14□□□□□ -0.47
COL18A1-205ENST00000423214 CTRB2Q6GPI1 263 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 SAMD12Q8N8I0 201 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 CXorf58Q96LI9 332 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 FANCD2OSQ96PS1 177 aa12.14□□□□□ -0.47
COL18A1-205ENST00000423214 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 TMEM213A2RRL7 107 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 E7EUB6 86 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 XRCC3O43542 346 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 TMEM127O75204 238 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 SCAF4O95104 1147 aaKnown RBP12.13□□□□□ -0.47
COL18A1-205ENST00000423214 CRYGCP07315 174 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 CATR1Q13166 79 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 ANKRD55Q3KP44 614 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 UBE2NLQ5JXB2 153 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 BTNL8Q6UX41 500 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 OR13F1Q8NGS4 319 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 OR4A5Q8NH83 315 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 GGTLC1Q9BX51 225 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 CCL28Q9NRJ3 127 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 BET1LQ9NYM9 111 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 MLXQ9UH92 298 aa12.13□□□□□ -0.47
COL18A1-205ENST00000423214 A0A1B0GW64 132 aa12.12□□□□□ -0.47
COL18A1-205ENST00000423214 MFSD2BA6NFX1 497 aa12.12□□□□□ -0.47
COL18A1-205ENST00000423214 MYOD1P15172 320 aa12.12□□□□□ -0.47
COL18A1-205ENST00000423214 MSMO1Q15800 293 aa12.12□□□□□ -0.47
COL18A1-205ENST00000423214 SPAG16Q8N0X2 631 aa12.12□□□□□ -0.47
COL18A1-205ENST00000423214 UXS1Q8NBZ7 420 aa12.12□□□□□ -0.47
COL18A1-205ENST00000423214 SLC25A46Q96AG3 418 aa12.12□□□□□ -0.47
COL18A1-205ENST00000423214 COMMD3Q9UBI1 195 aa12.12□□□□□ -0.47
COL18A1-205ENST00000423214 IGLV11-55A0A075B6I3 123 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 CYB5BO43169 146 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 PPYP01298 95 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 GPR183P32249 361 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 BRWD1-AS2P59051 145 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 TAS2R20P59543 309 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 FXYD4P59646 89 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 TMEM69Q5SWH9 247 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 RBPMS2Q6ZRY4 209 aaKnown RBP12.11□□□□□ -0.47
COL18A1-205ENST00000423214 ZBTB34Q8NCN2 500 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 MARC2Q969Z3 335 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 SLC5A7Q9GZV3 580 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 NAA50Q9GZZ1 169 aaKnown RBP12.11□□□□□ -0.47
COL18A1-205ENST00000423214 IFT46Q9NQC8 304 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 THYN1Q9P016 225 aa12.11□□□□□ -0.47
COL18A1-205ENST00000423214 LOC102724200A0A096LPH7 203 aaPredicted RBP12.1□□□□□ -0.47
COL18A1-205ENST00000423214 SULT1C2O00338 296 aa12.1□□□□□ -0.47
COL18A1-205ENST00000423214 RBFOX2O43251 390 aaKnown RBP eCLIP12.1□□□□□ -0.472e-7■■■□□ 16.9
COL18A1-205ENST00000423214 EIF4EP06730 217 aaKnown RBP12.1□□□□□ -0.47
COL18A1-205ENST00000423214 SMIM18P0DKX4 95 aa12.1□□□□□ -0.47
COL18A1-205ENST00000423214 NQO2P16083 231 aa12.1□□□□□ -0.47
COL18A1-205ENST00000423214 CBX5P45973 191 aa12.1□□□□□ -0.47
COL18A1-205ENST00000423214 TAS2R31P59538 309 aa12.1□□□□□ -0.47
COL18A1-205ENST00000423214 OR5AP2Q8NGF4 316 aa12.1□□□□□ -0.47
COL18A1-205ENST00000423214 OR1L6Q8NGR2 347 aa12.1□□□□□ -0.47
COL18A1-205ENST00000423214 COMMD5Q9GZQ3 224 aa12.1□□□□□ -0.47
COL18A1-205ENST00000423214 UFC1Q9Y3C8 167 aa12.1□□□□□ -0.47
COL18A1-205ENST00000423214 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 PMP2P02689 132 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 CLEC3BP05452 202 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 RFX2P48378 723 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 OR2B8PP59922 312 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 KLK9Q2XQG4 91 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 TM4SF20Q53R12 229 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 PLET1Q6UQ28 207 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms