RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 CRYBB3P26998 211 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 ATOH7Q8N100 152 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 MGST2Q99735 147 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 TMEM106BQ9NUM4 274 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 TMEM140Q9NV12 185 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 MT-CO2P00403 227 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 SLC35E4Q6ICL7 350 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 TIMM8BQ9Y5J9 83 aaPredicted RBP11.1□□□□□ -0.63
NCDN-201ENST00000356090 IRF2P14316 349 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 GCHFRP30047 84 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 GNG4P50150 75 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 KRTCAP3Q53RY4 240 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 RNFT1Q5M7Z0 435 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 C1orf194Q5T5A4 169 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 ETFRF1Q6IPR1 90 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 PQLC2Q6ZP29 291 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 LYG1Q8N1E2 194 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 TXN2Q99757 166 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 GGTLC1Q9BX51 225 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 PARD6GQ9BYG4 376 aaPredicted RBP11.09□□□□□ -0.63
NCDN-201ENST00000356090 RNASE7Q9H1E1 156 aaKnown RBP11.09□□□□□ -0.63
NCDN-201ENST00000356090 SPRR3Q9UBC9 169 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 TCF19Q9Y242 345 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 SS18L1O75177 396 aaPredicted RBP11.09□□□□□ -0.63
NCDN-201ENST00000356090 IL6RP08887 468 aaPredicted RBP11.09□□□□□ -0.63
NCDN-201ENST00000356090 PRDX2P32119 198 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
NCDN-201ENST00000356090 TMEM183BQ1AE95 376 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 RPEL1Q2QD12 228 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 ZNF766Q5HY98 468 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 WDR82Q6UXN9 313 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 CXXC4Q9H2H0 198 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 PPIAL4AQ9Y536 164 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 RPLP1P05386 114 aaKnown RBP11.09□□□□□ -0.63
NCDN-201ENST00000356090 IGFBP2P18065 325 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 TNFSF10P50591 281 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 RHOBP62745 196 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 PRR27Q6MZM9 219 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 Q6ZWC4 215 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
NCDN-201ENST00000356090 CACNA1HO95180 2353 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 ZNF253O75346 499 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 TNFSF15O95150 251 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 TYMSP04818 313 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 NPY1RP25929 384 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 CCL11P51671 97 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 CENPVQ7Z7K6 275 aaPredicted RBP11.08□□□□□ -0.64
NCDN-201ENST00000356090 MOB3BQ86TA1 216 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 ZNF586Q9NXT0 402 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 SPRY3O43610 288 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 DUTP33316 252 aaKnown RBP11.08□□□□□ -0.64
NCDN-201ENST00000356090 SUMO1P63165 101 aaKnown RBP11.08□□□□□ -0.64
NCDN-201ENST00000356090 TIGITQ495A1 244 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 TEPPQ6URK8 271 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 MIR17HGQ75NE6 70 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 NPVFQ9HCQ7 196 aa11.08□□□□□ -0.64
NCDN-201ENST00000356090 CA1P00915 261 aaPredicted RBP11.07□□□□□ -0.64
NCDN-201ENST00000356090 PDLIM4P50479 330 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 ZNF718Q3SXZ3 478 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 HES3Q5TGS1 186 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 FAM19A2Q8N3H0 131 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 GOLT1BQ9Y3E0 138 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 HELTA6NFD8 242 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 TDGF1P3P51864 188 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 EFNB3Q15768 340 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 CENPWQ5EE01 88 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 SSBP3Q9BWW4 388 aaPredicted RBP11.07□□□□□ -0.64
NCDN-201ENST00000356090 DIRC3C9JPN6 131 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 FOXL1Q12952 345 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 VWA1Q6PCB0 445 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 WNT10AQ9GZT5 417 aa11.07□□□□□ -0.64
NCDN-201ENST00000356090 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 OPRK1P41145 380 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 RANP62826 216 aaKnown RBP11.06□□□□□ -0.64
NCDN-201ENST00000356090 GABRA6Q16445 453 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 CD177Q8N6Q3 437 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 NEU1Q99519 415 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 GP6Q9HCN6 339 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 IL36BQ9NZH7 164 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 KMT2EQ8IZD2 1858 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 TNRC6AQ8NDV7 1962 aaKnown RBP11.06□□□□□ -0.64
NCDN-201ENST00000356090 TMEM210A6NLX4 147 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 IQCF6A8MYZ5 107 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 CA2P00918 260 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 RPL19P84098 196 aaKnown RBP11.06□□□□□ -0.64
NCDN-201ENST00000356090 PPP1R35Q8TAP8 253 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 RND1Q92730 232 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 SGK494Q96LW2 274 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 WISP2O76076 250 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 ZNF83P51522 516 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 MOGAT3Q86VF5 341 aa11.06□□□□□ -0.64
NCDN-201ENST00000356090 K7EN84 100 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 GFRA3O60609 400 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 NPSP0C0P6 89 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 FER1L6-AS2Q96M78 137 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms