RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 HIST1H2BKO60814 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 CLN5O75503 358 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST1H2BJP06899 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 NDUFB7P17568 137 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST1H2BOP23527 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 S100PP25815 95 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST1H2BBP33778 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 ATP5IP56385 69 aaPredicted RBP18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST1H2BDP58876 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST1H2BCP62807 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST2H2BEQ16778 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 TEPPQ6URK8 271 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST1H2BHQ93079 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST1H2BNQ99877 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 HIST1H2BMQ99879 126 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 OR51B2Q9Y5P1 312 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 CT45A6P0DMU7 189 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 CT45A5P0DMU8 189 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 CT45A7P0DMV0 189 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 GCSAMLQ5JQS6 135 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 NCMAPQ5T1S8 102 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 C16orf82Q7Z2V1 217 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 NANPQ8TBE9 248 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 OR5B12Q96R08 314 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 FKBP11Q9NYL4 201 aa18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 SLC25A10Q9UBX3 287 aaPredicted RBP18.25■□□□□ 0.51
NKX2-1-201ENST00000354822 MMP23AO75900 390 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 BSPH1Q075Z2 132 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 SLC35D1Q9NTN3 355 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 ZNF835Q9Y2P0 537 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 F6UZH7 168 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 H7BYZ3 331 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 UPK2O00526 184 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 CXorf1O96002 111 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 PFN1P07737 140 aaKnown RBP18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 STAG3L2P0CL84 134 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 STAG3L3P0CL85 134 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 SLC16A13Q7RTY0 426 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 PYGO2Q9BRQ0 406 aa18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 PATZ1Q9HBE1 687 aaKnown RBP18.24■□□□□ 0.51
NKX2-1-201ENST00000354822 THBDP07204 575 aa18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 DEFA4P12838 97 aa18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 MIC13Q5XKP0 118 aa18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 TGIF2LYQ8IUE0 185 aa18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 SSX3Q99909 188 aa18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 DCAF16Q9NXF7 216 aa18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 RAI1Q7Z5J4 1906 aaPredicted RBP18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 TET2Q6N021 2002 aaPredicted RBP18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 J3QR06 171 aa18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 CA2P00918 260 aa18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 RPL31P62899 125 aaKnown RBP18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 PLEKHA3Q9HB20 300 aa18.23■□□□□ 0.51
NKX2-1-201ENST00000354822 PPIAL4EA0A075B759 164 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 PPIAL4DF5H284 164 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 PPIAL4FP0DN26 164 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 RPL29P47914 159 aaKnown RBP18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 B2MP61769 119 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 PRCDQ00LT1 54 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 ARSJQ5FYB0 599 aaPredicted RBP18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 ZNF833PQ6ZTB9 187 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 SRD5A3Q9H8P0 318 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 SAP30LQ9HAJ7 183 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 BET1LQ9NYM9 111 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 PPIAL4AQ9Y536 164 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 PLCE1Q9P212 2302 aa18.22■□□□□ 0.51
NKX2-1-201ENST00000354822 ICE1Q9Y2F5 2266 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 ELOA3CA0A087WX78 387 aaPredicted RBP18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 CST9LP1Q5W188 147 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 SPNS3Q6ZMD2 512 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 OR51G1Q8NGK1 321 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 NGBQ9NPG2 151 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 TRGC1P0CF51 173 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 GALR1P47211 349 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 ABHD5Q8WTS1 349 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 C1orf159Q96HA4 380 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 ZNF714Q96N38 554 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 NIT2Q9NQR4 276 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 MSRB2Q9Y3D2 182 aa18.21■□□□□ 0.51
NKX2-1-201ENST00000354822 PTPRZ1P23471 2315 aaPredicted RBP18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 TMEM178BH3BS89 294 aa18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 NPPCP23582 126 aa18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 RHOBP62745 196 aa18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 OSR1Q8TAX0 266 aaPredicted RBP18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 ARL14EPLP0DKL9 152 aa18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 S100A2P29034 98 aa18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 OR5B3Q8NH48 314 aa18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 FRZBQ92765 325 aa18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 NEUROG1Q92886 237 aa18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 SNRNP40Q96DI7 357 aaKnown RBP18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 HINT2Q9BX68 163 aa18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 GAR1Q9NY12 217 aaKnown RBP18.2■□□□□ 0.5
NKX2-1-201ENST00000354822 PPP1R2P9O14990 202 aa18.19■□□□□ 0.5
NKX2-1-201ENST00000354822 APOA2P02652 100 aa18.19■□□□□ 0.5
NKX2-1-201ENST00000354822 CD99P14209 185 aa18.19■□□□□ 0.5
NKX2-1-201ENST00000354822 PHOX2AO14813 284 aa18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 MT-CO2P00403 227 aa18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 IGKV1-16P04430 117 aa18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 SRP14P37108 136 aaKnown RBP18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 UBE2G2P60604 165 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms