RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ACSF3Q4G176 576 aaPredicted RBP6.88□□□□□ -1.31
HPS4-201ENST00000336873 TRAT1Q6PIZ9 186 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 ATOH7Q8N100 152 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 ZNF645Q8N7E2 425 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 CIB3Q96Q77 187 aaPredicted RBP6.88□□□□□ -1.31
HPS4-201ENST00000336873 TAAR6Q96RI8 345 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 DDA1Q9BW61 102 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 MRPL37Q9BZE1 423 aaKnown RBP6.88□□□□□ -1.31
HPS4-201ENST00000336873 SRD5A3Q9H8P0 318 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 TMEM140Q9NV12 185 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 NAT8Q9UHE5 227 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 OR9G9P0C7N8 305 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 PAX9P55771 341 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 ZNF585BQ52M93 769 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 PYY3Q5JQD4 70 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 WDR82Q6UXN9 313 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 ZNF439Q8NDP4 499 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 IGFBPL1Q8WX77 278 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 CTDSP1Q9GZU7 261 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 TUBA4BQ9H853 241 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 ASCL3Q9NQ33 180 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 CTXND1A0A1B0GTU2 59 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 VSTM5A8MXK1 200 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 DKK1O94907 266 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 CA1P00915 261 aaPredicted RBP6.88□□□□□ -1.31
HPS4-201ENST00000336873 NPY1RP25929 384 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 CRYBB3P26998 211 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 NUTF2P61970 127 aaKnown RBP6.88□□□□□ -1.31
HPS4-201ENST00000336873 RPL31P62899 125 aaKnown RBP6.88□□□□□ -1.31
HPS4-201ENST00000336873 C10orf55Q5SWW7 151 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 HARBI1Q96MB7 349 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 TECRQ9NZ01 308 aaKnown RBP6.88□□□□□ -1.31
HPS4-201ENST00000336873 C5orf52A6NGY3 159 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 ETV2O00321 342 aaPredicted RBP6.87□□□□□ -1.31
HPS4-201ENST00000336873 IGKV1D-33P01593 117 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 IGKV1-33P01594 117 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 CSN3P07498 182 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 GABRA6Q16445 453 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 INO80CQ6PI98 192 aaPredicted RBP6.87□□□□□ -1.31
HPS4-201ENST00000336873 ACP7Q6ZNF0 438 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 Q6ZT83 130 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 MOB1BQ7L9L4 216 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 MS4A10Q96PG2 267 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 NPCDR1Q9BY65 106 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 LOC102723971A0A1B0GUV8 181 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 SCO2A0A1W2PP80 73 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 CEACAM18A8MTB9 384 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 UBE2CO00762 179 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 CA11O75493 328 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 RPLP1P05386 114 aaKnown RBP6.87□□□□□ -1.31
HPS4-201ENST00000336873 WT1P19544 449 aaPredicted RBP6.87□□□□□ -1.31
HPS4-201ENST00000336873 OR10J1P30954 320 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 RPL19P84098 196 aaKnown RBP6.87□□□□□ -1.31
HPS4-201ENST00000336873 PRSS8Q16651 343 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 TIGITQ495A1 244 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 DPPA3Q6W0C5 159 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 OR10W1Q8NGF6 305 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 VN1R17PQ8TDU5 208 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 LPAR2Q9HBW0 351 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 SNURFLB1AK76 121 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 SEC14L6B5MCN3 397 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 CIDEAO60543 219 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 LY6HO94772 140 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 CGAP01215 116 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 GZMHP20718 246 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 ZNF137PP52743 207 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 SPRNQ5BIV9 151 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 SPATA31B1PQ5VZV4 182 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 OR8I2Q8N0Y5 310 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 EAF1Q96JC9 268 aaPredicted RBP6.87□□□□□ -1.31
HPS4-201ENST00000336873 ASCL2Q99929 193 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 MS4A5Q9H3V2 200 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 SAP30LQ9HAJ7 183 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 SSUH2Q9Y2M2 353 aa6.87□□□□□ -1.31
HPS4-201ENST00000336873 IGFBP2P18065 325 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 C1orf185Q5T7R7 199 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 C1QL4Q86Z23 238 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 SSC4DQ8WTU2 575 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 TMEM18Q96B42 140 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 PLSCR2Q9NRY7 297 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 CBLN4Q9NTU7 201 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 CALYQ9NYX4 217 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 TCF19Q9Y242 345 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 SELENOKQ9Y6D0 94 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 IGHV2OR16-5A0A0B4J2B6 119 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 FOXI3A8MTJ6 420 aaPredicted RBP6.86□□□□□ -1.31
HPS4-201ENST00000336873 APOA2P02652 100 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 KIR2DL2P43627 348 aaPredicted RBP6.86□□□□□ -1.31
HPS4-201ENST00000336873 SERF2P84101 59 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 LRRC75BQ2VPJ9 315 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 HEPN1Q6WQI6 88 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 ZNF497Q6ZNH5 498 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 PQLC2Q6ZP29 291 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 Q6ZR03 302 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 OR1B1Q8NGR6 318 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 COQ2Q96H96 371 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 CEP192Q8TEP8 1941 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 MUC21A0A0G2JKD1 596 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 MUC21A0A140T8X8 626 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 SLC25A17O43808 307 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms