RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 MAP1LC3AQ9H492 121 aa15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 ELOVL5Q9NYP7 299 aa15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 TUBGCP6Q96RT7 1819 aa15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 FOXH1O75593 365 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 SMIM6P0DI80 62 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 RPS11P62280 158 aaKnown RBP eCLIP15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 ITLN2Q8WWU7 325 aaPredicted RBP15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 ZNF708P17019 499 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 IGFBP2P18065 325 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 GPR183P32249 361 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 TNFSF10P50591 281 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 ZNF385CQ66K41 422 aaPredicted RBP15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 SCN4AP35499 1836 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 NRXN2Q9P2S2 1712 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 M0R381 172 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 ZNF146Q15072 292 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 POC1AQ8NBT0 407 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 SPSB4Q96A44 273 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 DMRTA2Q96SC8 542 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 ATG101Q9BSB4 218 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 POLEQ07864 2286 aa15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 ZNF646O15015 1829 aaPredicted RBP15.8■□□□□ 0.12
SMARCC1-201ENST00000254480 SOD3P08294 240 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 CENPWQ5EE01 88 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 MSGN1A6NI15 193 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 CGAP01215 116 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 IL6RP08887 468 aaPredicted RBP15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 GCHFRP30047 84 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 OR4A47Q6IF82 309 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 TRAV30A0A087WSZ9 112 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 IFNL4K9M1U5 179 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 GCGP01275 180 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 FAM209AQ5JX71 171 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 CLEC19AQ6UXS0 136 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 C11orf44Q8N8P7 122 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 C18orf15Q96N68 181 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 TGFAP01135 160 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 BIVMQ86UB2 503 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 OR1P1Q8NH06 330 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 MRPL20Q9BYC9 149 aaKnown RBP15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 ZP1P60852 638 aa15.79■□□□□ 0.12
SMARCC1-201ENST00000254480 CSRP3P50461 194 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 C2orf68Q2NKX9 166 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 HIST1H4GQ99525 98 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 C7orf69Q9H7B7 122 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 BEX4Q9NWD9 120 aaPredicted RBP15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 FBXL7Q9UJT9 491 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 PLXNA1Q9UIW2 1896 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 RBFOX2O43251 390 aaKnown RBP eCLIP15.78■□□□□ 0.123e-7■□□□□ 8.1
SMARCC1-201ENST00000254480 SMIM8Q96KF7 97 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 LDLRAD4O15165 306 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 GCSAMLQ5JQS6 135 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 FAM159AQ6UWV7 190 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 MARVELD3Q96A59 401 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 SLC17A3O00476 420 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 HTN3P15516 51 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 CYP2G1PQ6ZSU1 146 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 CBLN1P23435 193 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 LINC00470Q9BZP3 86 aa15.78■□□□□ 0.12
SMARCC1-201ENST00000254480 FAM168AQ92567 244 aa15.77■□□□□ 0.12
SMARCC1-201ENST00000254480 FAM90A26D6RGX4 464 aa15.77■□□□□ 0.12
SMARCC1-201ENST00000254480 SNRPD3P62318 126 aaKnown RBP15.77■□□□□ 0.12
SMARCC1-201ENST00000254480 TRBV20OR9-2A0A075B6H5 130 aa15.77■□□□□ 0.12
SMARCC1-201ENST00000254480 MEIG1Q5JSS6 88 aa15.77■□□□□ 0.12
SMARCC1-201ENST00000254480 GLMPQ8WWB7 406 aa15.77■□□□□ 0.12
SMARCC1-201ENST00000254480 WDYHV1Q96HA8 205 aa15.77■□□□□ 0.12
SMARCC1-201ENST00000254480 OR4D5Q8NGN0 318 aa15.77■□□□□ 0.11
SMARCC1-201ENST00000254480 SFRP2Q96HF1 295 aa15.77■□□□□ 0.11
SMARCC1-201ENST00000254480 PPP1R17O96001 155 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 FAM57AQ8TBR7 257 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 SBF2Q86WG5 1849 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 FADS6Q8N9I5 356 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 TUBA4BQ9H853 241 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 RPRMQ9NS64 109 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 MOB4Q9Y3A3 225 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 DANCRP0C864 163 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 CEACAM1P13688 526 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 CD69Q07108 199 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 SCN10AQ9Y5Y9 1956 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 PINLYPA6NC86 204 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 DEPPQ9NTK1 212 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 INTS1Q8N201 2190 aaKnown RBP15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 PDCD11Q14690 1871 aaKnown RBP15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 HLA-DQA1P01909 254 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 GALNT14Q96FL9 552 aa15.76■□□□□ 0.11
SMARCC1-201ENST00000254480 SCN8AQ9UQD0 1980 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 CNOT1A5YKK6 2376 aaKnown RBP15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 TRAV24A0A0B4J272 114 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 LGALS3P17931 250 aaKnown RBP15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 DPM3Q9P2X0 92 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 LHFPL4Q7Z7J7 247 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 NPCDR1Q9BY65 106 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 IMMP1LQ96LU5 166 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 LOC390937A0A1W2PQ73 354 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 C1QTNF12Q5T7M4 302 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 LHX2P50458 406 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 IFITM2Q01629 132 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 ST6GALNAC3Q8NDV1 305 aa15.75■□□□□ 0.11
SMARCC1-201ENST00000254480 TBX6O95947 436 aaPredicted RBP15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 EP300Q09472 2414 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms