RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TMEM155Q4W5P6 130 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 AKR1C8PQ5T2L2 129 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 CSPG4Q6UVK1 2322 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 C19orf35Q6ZS72 473 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 TGIF2LXQ8IUE1 241 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 OR10P1Q8NGE3 313 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 OR8B3Q8NGG8 313 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 CD300LFQ8TDQ1 290 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 DDB2Q92466 427 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 RAB1CQ92928 201 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 TIMD4Q96H15 378 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 SMIM8Q96KF7 97 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 OR8B2Q96RD0 313 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 C20orf24Q9BUV8 137 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 TPSG1Q9NRR2 321 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 TCF19Q9Y242 345 aa2.8□□□□□ -1.96
LIG4-205ENST00000614526 NAV3Q8IVL0 2385 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 CHD6Q8TD26 2715 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 IGHV3-21A0A0B4J1V1 117 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 E7EUB6 86 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 SLC25A17O43808 307 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 SEC11BP0C7V7 166 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 OR13C7P0DN81 318 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 SLC25A6P12236 298 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 FGF7P21781 194 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 GPR6P46095 362 aaPredicted RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 GNB1P62873 340 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 HBG1P69891 147 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 HBG2P69892 147 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 RTL8BQ17RB0 113 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 GCSAMLQ5JQS6 135 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 C11orf71Q6IPW1 123 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TMEM88Q6PEY1 159 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 ETV3LQ6ZN32 361 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 HSD17B13Q7Z5P4 300 aaPredicted RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 PCGF1Q9BSM1 259 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TMEM133Q9H2Q1 129 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 RAB9BQ9NP90 201 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 MMP26Q9NRE1 261 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 RPRMQ9NS64 109 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 OR51B2Q9Y5P1 312 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TET2Q6N021 2002 aaPredicted RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 IGHV3OR16-10A0A075B7F0 116 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 IGHV2-26A0A0B4J1V2 119 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 C15orf62A8K5M9 175 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 RNASEK-C17orf49H0YIS7 233 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 H0YJW9 148 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 NDUFA2O43678 99 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 APOA2P02652 100 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 H2AFB1P0C5Y9 115 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 ADCYAP1P18509 176 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 ZFP36P26651 326 aaKnown RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 PPOXP50336 477 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 RAB13P51153 203 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 DLX6P56179 175 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 BTNL8Q6UX41 500 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 LHFPL4Q7Z7J7 247 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 OR9G1Q8NH87 305 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 C17orf50Q8WW18 174 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 LHX4Q969G2 390 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 FLYWCH2Q96CP2 140 aaKnown RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 NEIL1Q96FI4 390 aaPredicted RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 TSNAXQ99598 290 aaKnown RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 BPESC1Q9GZL8 116 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 HIPK2Q9H2X6 1198 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 SEBOXQ9HB31 216 aaPredicted RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 UQCC1Q9NVA1 299 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 KAAG1Q9UBP8 84 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 LOC105371242A0A075B767 164 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TMEM218A2RU14 115 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 ZFP92A6NM28 416 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 A6NNC1 897 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TSPAN4O14817 238 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 DFFBO76075 338 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 HRASP01112 189 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 OR8U8P0C7N1 319 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 ZP3P21754 424 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 F2RL1P55085 397 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 LGALS4P56470 323 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TAS2R30P59541 319 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 RAB2AP61019 212 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 SSX2Q16385 188 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 LDLRAD2Q5SZI1 272 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TMEM14EPQ6UXP3 125 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 SSX7Q7RTT5 188 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TMEM170AQ8WVE7 144 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 SSMEM1Q8WWF3 244 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TAF15Q92804 592 aaKnown RBP eCLIP2.79□□□□□ -1.96
LIG4-205ENST00000614526 PINX1Q96BK5 328 aaKnown RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 NABP2Q9BQ15 211 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 SSBP3Q9BWW4 388 aaPredicted RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 WDR61Q9GZS3 305 aaKnown RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 ARV1Q9H2C2 271 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 TMPRSS5Q9H3S3 457 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 SLC25A22Q9H936 323 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 PATZ1Q9HBE1 687 aaKnown RBP2.79□□□□□ -1.96
LIG4-205ENST00000614526 ENY2Q9NPA8 101 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 COA4Q9NYJ1 87 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 INSIG2Q9Y5U4 225 aa2.79□□□□□ -1.96
LIG4-205ENST00000614526 CCDC168Q8NDH2 2452 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 223.5 ms