RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 SLC35E3Q7Z769 313 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 SPAG16Q8N0X2 631 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 Q8N9W7 124 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 OR5AN1Q8NGI8 311 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 RBMXL1Q96E39 390 aaKnown RBP11.89□□□□□ -0.51
RAB40B-203ENST00000570676 TP53RKQ96S44 253 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 SEC22CQ9BRL7 303 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 SLC35D1Q9NTN3 355 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 LINC00527Q9UJ94 153 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 C9orf170A2RU37 121 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 LINC01548A6NM66 108 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 PRAF2O60831 178 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 B3GALNT1O75752 331 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 SFT2D2O95562 160 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 HLA-AP01891 365 aaKnown RBP11.88□□□□□ -0.51
RAB40B-203ENST00000570676 IL5P05113 134 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 OR5AC1P0C628 307 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 ANXA3P12429 323 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 CD1BP29016 333 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 MC5RP33032 325 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 RPL23AP62750 156 aaKnown RBP11.88□□□□□ -0.51
RAB40B-203ENST00000570676 CBX3Q13185 183 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 DHRS2Q13268 280 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 RTL8BQ17RB0 113 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 LYG2Q86SG7 212 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 STPG2Q8N412 459 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 TCTEX1D1Q8N7M0 179 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 OR52B4Q8NGK2 314 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 CD300LFQ8TDQ1 290 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 CASTOR1Q8WTX7 329 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 GALNT14Q96FL9 552 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 GPN1Q9HCN4 374 aaPredicted RBP11.88□□□□□ -0.51
RAB40B-203ENST00000570676 PLSCR3Q9NRY6 295 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 WASHC3Q9Y3C0 194 aa11.88□□□□□ -0.51
RAB40B-203ENST00000570676 RAMP3O60896 148 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 MOSP00540 346 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 SERPINE2P07093 398 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 RRASP10301 218 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 BRWD1-AS2P59051 145 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 TATDN3Q17R31 274 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 C18orf65Q6ZTR6 163 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 FAM71E2Q8N5Q1 922 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 LINC00482Q8N8I6 264 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 OR4S2Q8NH73 311 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 TMEM222Q9H0R3 208 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 PRR13Q9NZ81 148 aa11.87□□□□□ -0.51
RAB40B-203ENST00000570676 A0A0B4J293 547 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 NCBP2LA6PVI3 153 aaKnown RBP11.86□□□□□ -0.51
RAB40B-203ENST00000570676 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAB40B-203ENST00000570676 DUS4LO95620 317 aaKnown RBP11.86□□□□□ -0.51
RAB40B-203ENST00000570676 CRYZL1O95825 349 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 UCP1P25874 307 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 LPAR6P43657 344 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 TMEM187Q14656 261 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 ZNF585BQ52M93 769 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 PDPNQ86YL7 162 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 FOXRED2Q8IWF2 684 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 ZNF431Q8TF32 576 aaPredicted RBP11.86□□□□□ -0.51
RAB40B-203ENST00000570676 GLYATL2Q8WU03 294 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 RCC1LQ96I51 464 aaKnown RBP11.86□□□□□ -0.51
RAB40B-203ENST00000570676 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
RAB40B-203ENST00000570676 ALG5Q9Y673 324 aa11.86□□□□□ -0.51
RAB40B-203ENST00000570676 AP4M1O00189 453 aa11.85□□□□□ -0.51
RAB40B-203ENST00000570676 S1PR2O95136 353 aa11.85□□□□□ -0.51
RAB40B-203ENST00000570676 IGKV1-16P04430 117 aa11.85□□□□□ -0.51
RAB40B-203ENST00000570676 ANKRD55Q3KP44 614 aa11.85□□□□□ -0.51
RAB40B-203ENST00000570676 C8orf86Q6ZUL3 223 aa11.85□□□□□ -0.51
RAB40B-203ENST00000570676 MRPL41Q8IXM3 137 aaKnown RBP11.85□□□□□ -0.51
RAB40B-203ENST00000570676 COMMD1Q8N668 190 aa11.85□□□□□ -0.51
RAB40B-203ENST00000570676 OR8H1Q8NGG4 311 aa11.85□□□□□ -0.51
RAB40B-203ENST00000570676 MRAPQ8TCY5 172 aa11.85□□□□□ -0.51
RAB40B-203ENST00000570676 FLYWCH2Q96CP2 140 aaKnown RBP11.85□□□□□ -0.51
RAB40B-203ENST00000570676 HSPB9Q9BQS6 159 aa11.85□□□□□ -0.51
RAB40B-203ENST00000570676 C7orf66A4D0T2 115 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 SNRPGP15A8MWD9 76 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 CREBL2O60519 120 aaPredicted RBP11.84□□□□□ -0.51
RAB40B-203ENST00000570676 HPRT1P00492 218 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 F2RL1P55085 397 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 RPS16P62249 146 aaKnown RBP11.84□□□□□ -0.51
RAB40B-203ENST00000570676 SLC35B1P78383 322 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 SRPXP78539 464 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 CFHR3Q02985 330 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 TMEM177Q53S58 311 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 LIN54Q6MZP7 749 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 Q6ZNX1 250 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 ZNF695Q8IW36 515 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 LGI3Q8N145 548 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 COQ8AQ8NI60 647 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 MITD1Q8WV92 249 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 TMEM56Q96MV1 263 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 PHB2Q99623 299 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 PLEKHA2Q9HB19 425 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 ZFP57Q9NU63 452 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 TMEM56-RWDD3S4R434 201 aa11.84□□□□□ -0.51
RAB40B-203ENST00000570676 SHOXO15266 292 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 CDS2O95674 445 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 IGKV1-39P01597 117 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 IGKV1D-39P04432 117 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 RPA2P15927 270 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms