RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 LRRC39Q96DD0 335 aa-0.62□□□□□ -2.51
CASC4-211ENST00000561305 RBMX2Q9Y388 322 aaKnown RBP-0.62□□□□□ -2.51
CASC4-211ENST00000561305 SYNGR1O43759 233 aa-0.63□□□□□ -2.51
CASC4-211ENST00000561305 LDOC1O95751 146 aaPredicted RBP-0.63□□□□□ -2.51
CASC4-211ENST00000561305 SPATA24Q86W54 205 aa-0.63□□□□□ -2.51
CASC4-211ENST00000561305 RORBQ92753 470 aa-0.63□□□□□ -2.51
CASC4-211ENST00000561305 RAB1BQ9H0U4 201 aa-0.63□□□□□ -2.51
CASC4-211ENST00000561305 XAGE1AQ9HD64 81 aa-0.63□□□□□ -2.51
CASC4-211ENST00000561305 ZNHIT6Q9NWK9 470 aaKnown RBP-0.63□□□□□ -2.51
CASC4-211ENST00000561305 CD300AQ9UGN4 299 aa-0.63□□□□□ -2.51
CASC4-211ENST00000561305 KLK9Q9UKQ9 250 aa-0.63□□□□□ -2.51
CASC4-211ENST00000561305 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.63□□□□□ -2.51
CASC4-211ENST00000561305 COL1A1P02452 1464 aaPredicted RBP-0.63□□□□□ -2.51
CASC4-211ENST00000561305 MCM3APO60318 1980 aa-0.63□□□□□ -2.51
CASC4-211ENST00000561305 E9PCH4 1651 aa-0.64□□□□□ -2.51
CASC4-211ENST00000561305 OTCP00480 354 aa-0.64□□□□□ -2.51
CASC4-211ENST00000561305 METTL15P1P0C7V9 234 aa-0.64□□□□□ -2.51
CASC4-211ENST00000561305 CFL1P23528 166 aaKnown RBP-0.64□□□□□ -2.51
CASC4-211ENST00000561305 F8A1P23610 371 aa-0.64□□□□□ -2.51
CASC4-211ENST00000561305 SGMS2Q8NHU3 365 aa-0.64□□□□□ -2.51
CASC4-211ENST00000561305 CCDC12Q8WUD4 166 aaPredicted RBP-0.64□□□□□ -2.51
CASC4-211ENST00000561305 SMIM12Q96EX1 92 aa-0.64□□□□□ -2.51
CASC4-211ENST00000561305 CISHQ9NSE2 258 aa-0.64□□□□□ -2.51
CASC4-211ENST00000561305 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.64□□□□□ -2.51
CASC4-211ENST00000561305 PTPRZ1P23471 2315 aaPredicted RBP-0.64□□□□□ -2.51
CASC4-211ENST00000561305 DENND4CQ5VZ89 1909 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 RAB19A4D1S5 217 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 NCR3O14931 201 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 CST4P01036 141 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 ATP5G1P05496 136 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 HLA-DQB2P05538 268 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 RAB8AP61006 207 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 RASSF6Q6ZTQ3 369 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 LRRC45Q96CN5 670 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 TIMM22Q9Y584 194 aa-0.65□□□□□ -2.51
CASC4-211ENST00000561305 TMEM269A0A1B0GVZ9 245 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 C21orf140B9A014 251 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 CLDN25C9JDP6 229 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 HIST1H1CP16403 213 aaKnown RBP-0.66□□□□□ -2.52
CASC4-211ENST00000561305 SLCO1A2P46721 670 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 FXYD2P54710 66 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 DLX6P56179 175 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 GNA13Q14344 377 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 RAB2BQ8WUD1 216 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 PATE1Q8WXA2 126 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 TMEM208Q9BTX3 173 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 PARVAQ9NVD7 372 aa-0.66□□□□□ -2.52
CASC4-211ENST00000561305 FUOMA2VDF0 154 aa-0.67□□□□□ -2.52
CASC4-211ENST00000561305 INE1O15225 51 aa-0.67□□□□□ -2.52
CASC4-211ENST00000561305 HYPMO75409 117 aa-0.67□□□□□ -2.52
CASC4-211ENST00000561305 SFTPCP11686 197 aa-0.67□□□□□ -2.52
CASC4-211ENST00000561305 BRS3P32247 399 aa-0.67□□□□□ -2.52
CASC4-211ENST00000561305 SPINK7P58062 85 aa-0.67□□□□□ -2.52
CASC4-211ENST00000561305 ZNF676Q8N7Q3 588 aa-0.67□□□□□ -2.52
CASC4-211ENST00000561305 ENPP5Q9UJA9 477 aa-0.67□□□□□ -2.52
CASC4-211ENST00000561305 ZFYVE26Q68DK2 2539 aa-0.68□□□□□ -2.52
CASC4-211ENST00000561305 NSA2O95478 260 aaKnown RBP-0.68□□□□□ -2.52
CASC4-211ENST00000561305 EFNA4P52798 201 aa-0.68□□□□□ -2.52
CASC4-211ENST00000561305 RPL30P62888 115 aaKnown RBP-0.68□□□□□ -2.52
CASC4-211ENST00000561305 FABP5Q01469 135 aa-0.68□□□□□ -2.52
CASC4-211ENST00000561305 DYNC2LI1Q8TCX1 351 aa-0.68□□□□□ -2.52
CASC4-211ENST00000561305 BCL7BQ9BQE9 202 aa-0.68□□□□□ -2.52
CASC4-211ENST00000561305 MRM2Q9UI43 246 aaKnown RBP-0.68□□□□□ -2.52
CASC4-211ENST00000561305 HDGFL3Q9Y3E1 203 aa-0.68□□□□□ -2.52
CASC4-211ENST00000561305 ASCC3Q8N3C0 2202 aaKnown RBP-0.68□□□□□ -2.52
CASC4-211ENST00000561305 FLNCQ14315 2725 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 ABCA4P78363 2273 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 GOLGA8QA0A0J9YX86 632 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 CLPSP04118 112 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 HAAOP46952 286 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 HPCAP84074 193 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 DMTNQ08495 405 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 CLEC12BQ2HXU8 276 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 C10orf67Q8IYJ2 551 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 OR11H6Q8NGC7 330 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 OR52E4Q8NGH9 312 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 PRRG3Q9BZD7 231 aa-0.69□□□□□ -2.52
CASC4-211ENST00000561305 TMED7-TICAM2A0A0A6YYA0 188 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 METTL15A6NJ78 407 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 LEPROTO15243 131 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 SLC22A1O15245 554 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 CSTAP01040 98 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 SULT1A3P0DMM9 295 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 SULT1A4P0DMN0 295 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 NFYAP23511 347 aaPredicted RBP-0.7□□□□□ -2.52
CASC4-211ENST00000561305 GRPRP30550 384 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 OR4D1Q15615 310 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 SPINK9Q5DT21 86 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 ST13P4Q8IZP2 240 aaPredicted RBP-0.7□□□□□ -2.52
CASC4-211ENST00000561305 BORCS5Q969J3 196 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 CCL13Q99616 98 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 OR8D2Q9GZM6 311 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 HMCN2Q8NDA2 5059 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 HIVEP3Q5T1R4 2406 aa-0.7□□□□□ -2.52
CASC4-211ENST00000561305 SULT1C2O00338 296 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 COX7A2LO14548 114 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 LINC00614P0C842 121 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 PTMSP20962 102 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 MIPP30301 263 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 SAPCD1Q5SSQ6 148 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms