RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TMEM167AQ8TBQ9 72 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 THAP7Q9BT49 309 aaPredicted RBP10.77□□□□□ -0.69
SNX6-210ENST00000557341 PALMDQ9NP74 551 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 TENM2Q9NT68 2774 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 DYNC2H1Q8NCM8 4307 aaKnown RBP10.76□□□□□ -0.69
SNX6-210ENST00000557341 TRAV18A0A075B6X5 111 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 HMX3A6NHT5 357 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 NPIPB5A8MRT5 1133 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 HRASP01112 189 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 CLEC2LP0C7M8 214 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 LYL1P12980 280 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 MSMO1Q15800 293 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 OR5H6Q8NGV6 325 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 DYNLRB2Q8TF09 96 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 SECTM1Q8WVN6 248 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 ISOC1Q96CN7 298 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
SNX6-210ENST00000557341 FYTTD1Q96QD9 318 aaKnown RBP10.76□□□□□ -0.69
SNX6-210ENST00000557341 SPATA25Q9BR10 227 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 RNF167Q9H6Y7 350 aa10.76□□□□□ -0.69
SNX6-210ENST00000557341 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 TNFSF12O43508 249 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 DHFRP00374 187 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 PPYP01298 95 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 ZNF735P0CB33 412 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 FCGR2CP31995 323 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 NEDD8Q15843 81 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 SSX9Q7RTT3 188 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 HOGA1Q86XE5 327 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 LAX1Q8IWV1 398 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 GVQW1Q8N7I0 195 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 GPHA2Q96T91 129 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 AIFM2Q9BRQ8 373 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 TUBA4BQ9H853 241 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 SLC2A9Q9NRM0 540 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 FBXL7Q9UJT9 491 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 STARD9Q9P2P6 4700 aa10.75□□□□□ -0.69
SNX6-210ENST00000557341 PPP5D1E7EU14 171 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 E7EUB6 86 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 TMEM127O75204 238 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 GGCTO75223 188 aaKnown RBP10.74□□□□□ -0.69
SNX6-210ENST00000557341 IL6RP08887 468 aaPredicted RBP10.74□□□□□ -0.69
SNX6-210ENST00000557341 BRWD1-AS2P59051 145 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
SNX6-210ENST00000557341 CATR1Q13166 79 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 TIMM50Q3ZCQ8 353 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 C19orf35Q6ZS72 473 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 SPAG16Q8N0X2 631 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 ZBTB34Q8NCN2 500 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 OR4A5Q8NH83 315 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 LYSTQ99698 3801 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 DIABLOQ9NR28 239 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 CCL28Q9NRJ3 127 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 BET1LQ9NYM9 111 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 RYR2Q92736 4967 aa10.74□□□□□ -0.69
SNX6-210ENST00000557341 A0A1B0GW64 132 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 RBFOX2O43251 390 aaKnown RBP eCLIP10.73□□□□□ -0.691e-8■■■■■ 29.5
SNX6-210ENST00000557341 CRYGCP07315 174 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 PTHLHP12272 177 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 AREGP15514 252 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 HLA-GP17693 338 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 PSMB6P28072 239 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 CBX5P45973 191 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 MECP2P51608 486 aaKnown RBP10.73□□□□□ -0.69
SNX6-210ENST00000557341 FXYD4P59646 89 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 CD81P60033 236 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 HAGHQ16775 308 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 CD300EQ496F6 205 aaPredicted RBP10.73□□□□□ -0.69
SNX6-210ENST00000557341 KCTD21Q4G0X4 260 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 OR4A47Q6IF82 309 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 SLC5A7Q9GZV3 580 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 AUNIPQ9H7T9 357 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 EDA2RQ9HAV5 297 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 HRASLSQ9HDD0 168 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 SLC2A8Q9NY64 477 aa10.73□□□□□ -0.69
SNX6-210ENST00000557341 C2orf70A6NJV1 201 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 LGALS9O00182 355 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 TPPPO94811 219 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 HLA-AP01891 365 aaKnown RBP10.72□□□□□ -0.69
SNX6-210ENST00000557341 HIST1H1BP16401 226 aaKnown RBP10.72□□□□□ -0.69
SNX6-210ENST00000557341 CTRB1P17538 263 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 ARL3P36405 182 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 TAS2R31P59538 309 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 CTRB2Q6GPI1 263 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 TMEM17Q86X19 198 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 CROCCP3Q8IVE0 287 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 OR5AP2Q8NGF4 316 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 EEF1AKMT3Q96AZ1 226 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 CCDC140Q96MF4 163 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 FANCD2OSQ96PS1 177 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 NEURL2Q9BR09 285 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 PLEKHA3Q9HB20 300 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 IFT46Q9NQC8 304 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 DMRT1Q9Y5R6 373 aa10.72□□□□□ -0.69
SNX6-210ENST00000557341 SULT1C2O00338 296 aa10.71□□□□□ -0.69
SNX6-210ENST00000557341 HPRT1P00492 218 aa10.71□□□□□ -0.69
SNX6-210ENST00000557341 IGHV3-23P01764 117 aa10.71□□□□□ -0.69
SNX6-210ENST00000557341 IFNA6P05013 189 aa10.71□□□□□ -0.69
SNX6-210ENST00000557341 REG1AP05451 166 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms