RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 OR2A7Q96R45 310 aa15.81■□□□□ 0.12
VTI1B-205ENST00000555543 ZNF701M0R085 212 aaPredicted RBP15.8■□□□□ 0.12
VTI1B-205ENST00000555543 RBFOX2O43251 390 aaKnown RBP eCLIP15.8■□□□□ 0.12
VTI1B-205ENST00000555543 ACTL6BO94805 426 aa15.8■□□□□ 0.12
VTI1B-205ENST00000555543 BRI3O95415 125 aa15.8■□□□□ 0.12
VTI1B-205ENST00000555543 OR9G9P0C7N8 305 aa15.8■□□□□ 0.12
VTI1B-205ENST00000555543 RCVRNP35243 200 aa15.8■□□□□ 0.12
VTI1B-205ENST00000555543 CATR1Q13166 79 aa15.8■□□□□ 0.12
VTI1B-205ENST00000555543 AADACL3Q5VUY0 350 aa15.8■□□□□ 0.12
VTI1B-205ENST00000555543 VSTM2AQ8TAG5 236 aa15.8■□□□□ 0.12
VTI1B-205ENST00000555543 MIXL1Q9H2W2 232 aa15.8■□□□□ 0.12
VTI1B-205ENST00000555543 EXTL2Q9UBQ6 330 aa15.8■□□□□ 0.12
VTI1B-205ENST00000555543 RSL24D1Q9UHA3 163 aaKnown RBP15.8■□□□□ 0.12
VTI1B-205ENST00000555543 A0A1B0GW64 132 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 CCDC160A6NGH7 325 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 TEX22C9J3V5 150 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 E7EUB6 86 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 OVOL1O14753 267 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 MPPED1O15442 326 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 HRASP01112 189 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 HSPB1P04792 205 aaKnown RBP15.79■□□□□ 0.12
VTI1B-205ENST00000555543 MYOD1P15172 320 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 TMBIM6P55061 237 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 SPIN2AQ99865 258 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 SPIN2BQ9BPZ2 258 aa15.79■□□□□ 0.12
VTI1B-205ENST00000555543 C13orf42A0A1B0GVH6 325 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 HMX3A6NHT5 357 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 S1PR2O95136 353 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 PRH1P02810 166 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 RLN1P04808 185 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 IL6RP08887 468 aaPredicted RBP15.78■□□□□ 0.12
VTI1B-205ENST00000555543 DGCR2P98153 550 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 OR4A47Q6IF82 309 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 C19orf35Q6ZS72 473 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 LAX1Q8IWV1 398 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 OR6F1Q8NGZ6 308 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 RAB2BQ8WUD1 216 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 ISOC1Q96CN7 298 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 BCL7BQ9BQE9 202 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 KLK11Q9UBX7 282 aa15.78■□□□□ 0.12
VTI1B-205ENST00000555543 A0A0G2JLM5 398 aa15.77■□□□□ 0.12
VTI1B-205ENST00000555543 M0QYG6 137 aa15.77■□□□□ 0.12
VTI1B-205ENST00000555543 NOL3O60936 208 aaKnown RBP15.77■□□□□ 0.12
VTI1B-205ENST00000555543 PGLYRP1O75594 196 aaPredicted RBP15.77■□□□□ 0.12
VTI1B-205ENST00000555543 RPL27AP46776 148 aaKnown RBP15.77■□□□□ 0.12
VTI1B-205ENST00000555543 TAS2R31P59538 309 aa15.77■□□□□ 0.12
VTI1B-205ENST00000555543 ZNF45Q02386 682 aa15.77■□□□□ 0.12
VTI1B-205ENST00000555543 OR52I2Q8NH67 350 aa15.77■□□□□ 0.12
VTI1B-205ENST00000555543 BORCS5Q969J3 196 aa15.77■□□□□ 0.12
VTI1B-205ENST00000555543 ABHD1Q96SE0 405 aa15.77■□□□□ 0.12
VTI1B-205ENST00000555543 BET1LQ9NYM9 111 aa15.77■□□□□ 0.12
VTI1B-205ENST00000555543 COL7A1Q02388 2944 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 TRAV3A0A0B4J244 114 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 ANKRD34BA5PLL1 514 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 CTDSP2O14595 271 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 HPRT1P00492 218 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 TRBV12-3P01733 135 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 RPL8P62917 257 aaKnown RBP15.76■□□□□ 0.11
VTI1B-205ENST00000555543 POU2AF1Q16633 256 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 TTC9CQ8N5M4 171 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 DYNC2LI1Q8TCX1 351 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 DNAH9Q9NYC9 4486 aa15.76■□□□□ 0.11
VTI1B-205ENST00000555543 TRBV9A0A0B4J1U6 114 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 CGB1A6NKQ9 187 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 GPR31O00270 319 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 ZNF735P0CB33 412 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 RPA2P15927 270 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 NQO2P16083 231 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 HLA-GP17693 338 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 MAS1LP35410 378 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 ECI1P42126 302 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 TSPAN5P62079 268 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 PHLDA2Q53GA4 152 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 ZNF343Q6P1L6 599 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 CD300LFQ8TDQ1 290 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 FYTTD1Q96QD9 318 aaKnown RBP15.75■□□□□ 0.11
VTI1B-205ENST00000555543 PRR25Q96S07 402 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 PLEKHA2Q9HB19 425 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 HRASLSQ9HDD0 168 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 AKIP1Q9NQ31 210 aa15.75■□□□□ 0.11
VTI1B-205ENST00000555543 RGS5O15539 181 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 AREGP15514 252 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 F2RP25116 425 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 RHOGP84095 191 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 CNPY1Q3B7I2 92 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 VAX1Q5SQQ9 334 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 CMTM1Q8IZ96 169 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 OR4A5Q8NH83 315 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 USMG5Q96IX5 58 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 RANGRFQ9HD47 186 aaPredicted RBP15.74■□□□□ 0.11
VTI1B-205ENST00000555543 TMEM140Q9NV12 185 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 COMMD9Q9P000 198 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 CCDC59Q9P031 241 aaKnown RBP15.74■□□□□ 0.11
VTI1B-205ENST00000555543 MTFP1Q9UDX5 166 aa15.74■□□□□ 0.11
VTI1B-205ENST00000555543 H3BMQ9 156 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 UPK2O00526 184 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 SAP30O75446 220 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 TPPPO94811 219 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 CD3DP04234 171 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 INSL3P51460 131 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms