RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PPP5D1E7EU14 171 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 C15orf65H3BRN8 121 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 K7EM74 188 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 P0C879 139 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
BNIP3-202ENST00000540159 PRB3Q04118 309 aaPredicted RBP11.31□□□□□ -0.6
BNIP3-202ENST00000540159 MORN2Q502X0 79 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 PDLIM3Q53GG5 364 aaPredicted RBP11.31□□□□□ -0.6
BNIP3-202ENST00000540159 PHOX2AO14813 284 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 IGHV3-48P01763 117 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 ARL14EPLP0DKL9 152 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 EIF4EBP1Q13541 118 aaPredicted RBP11.31□□□□□ -0.6
BNIP3-202ENST00000540159 SEM1Q6ZVN7 128 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 TCF23Q7RTU1 214 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 PARD6AQ9NPB6 346 aa11.31□□□□□ -0.6
BNIP3-202ENST00000540159 XKRY2A2RUG3 117 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 MMP23AO75900 390 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 CD82P27701 267 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 SARAFQ96BY9 339 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 FAM90A26D6RGX4 464 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 RAB29O14966 203 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 SPINK4O60575 86 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 FAM27E3Q08E93 113 aa11.3□□□□□ -0.6
BNIP3-202ENST00000540159 ZNF71Q9NQZ8 489 aaPredicted RBP11.3□□□□□ -0.6
BNIP3-202ENST00000540159 SPTAN1Q13813 2472 aaKnown RBP11.3□□□□□ -0.6
BNIP3-202ENST00000540159 TRAV17A0A0B4J275 112 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 B4DEV8 164 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 CD33P20138 364 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 GNB1P62873 340 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 GNB2P62879 340 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 FAM216BQ8N7L0 139 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 S1PR3Q99500 378 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 CCL13Q99616 98 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 HSD17B10Q99714 261 aaKnown RBP11.29□□□□□ -0.6
BNIP3-202ENST00000540159 COL6A6A6NMZ7 2263 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 PTPRBP23467 1997 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 IGF2RP11717 2491 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 PRR33A8MZF0 331 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 FOXH1O75593 365 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 REG1BP48304 166 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 ERVK-16P61578 105 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 CCL8P80075 99 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 MLANAQ16655 118 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 NEIL1Q96FI4 390 aaPredicted RBP11.29□□□□□ -0.6
BNIP3-202ENST00000540159 P2RX4Q99571 388 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 SCO2A0A1W2PP80 73 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 ZNF474Q6S9Z5 364 aaPredicted RBP11.29□□□□□ -0.6
BNIP3-202ENST00000540159 TMEM170AQ8WVE7 144 aa11.29□□□□□ -0.6
BNIP3-202ENST00000540159 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
BNIP3-202ENST00000540159 SPTBN1Q01082 2364 aaKnown RBP11.28□□□□□ -0.6
BNIP3-202ENST00000540159 IGHG3P01860 377 aa11.28□□□□□ -0.6
BNIP3-202ENST00000540159 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
BNIP3-202ENST00000540159 RND2P52198 227 aa11.28□□□□□ -0.6
BNIP3-202ENST00000540159 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
BNIP3-202ENST00000540159 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
BNIP3-202ENST00000540159 MAP1AP78559 2803 aaPredicted RBP11.28□□□□□ -0.6
BNIP3-202ENST00000540159 ACOT6Q3I5F7 207 aaPredicted RBP11.28□□□□□ -0.6
BNIP3-202ENST00000540159 Q8N7P7 452 aa11.28□□□□□ -0.6
BNIP3-202ENST00000540159 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
BNIP3-202ENST00000540159 CIB3Q96Q77 187 aaPredicted RBP11.28□□□□□ -0.6
BNIP3-202ENST00000540159 MGST2Q99735 147 aa11.28□□□□□ -0.6
BNIP3-202ENST00000540159 IFI27L2Q9H2X8 130 aa11.28□□□□□ -0.6
BNIP3-202ENST00000540159 CALYQ9NYX4 217 aa11.28□□□□□ -0.6
BNIP3-202ENST00000540159 SAA2-SAA4A0A096LPE2 208 aa11.27□□□□□ -0.6
BNIP3-202ENST00000540159 PIGBOS1A0A0B4J2F0 54 aa11.27□□□□□ -0.6
BNIP3-202ENST00000540159 ZNF320A2RRD8 509 aa11.27□□□□□ -0.6
BNIP3-202ENST00000540159 C17orf112F2Z3M2 114 aa11.27□□□□□ -0.6
BNIP3-202ENST00000540159 SAA2P0DJI9 122 aaPredicted RBP11.27□□□□□ -0.6
BNIP3-202ENST00000540159 FAM216AQ8WUB2 273 aa11.27□□□□□ -0.6
BNIP3-202ENST00000540159 HIPK2Q9H2X6 1198 aa11.27□□□□□ -0.6
BNIP3-202ENST00000540159 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.6
BNIP3-202ENST00000540159 TRBV20OR9-2A0A075B6H5 130 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 RBFOX2O43251 390 aaKnown RBP eCLIP11.27□□□□□ -0.614e-8■■■■□ 22.4
BNIP3-202ENST00000540159 LURAP1Q96LR2 239 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 ASCL3Q9NQ33 180 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 TCF19Q9Y242 345 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 GRIFINA4D1Z8 144 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 AHRRA9YTQ3 701 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 SRRM5B3KS81 715 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 SLC17A3O00476 420 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 IGKV1-16P04430 117 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 SLC35B1P78383 322 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 DEFA6Q01524 100 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 PMS2P11Q13670 270 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 CT45A1Q5HYN5 189 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 PRR31Q5SQ13 230 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 CT45A3Q8NHU0 189 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 LRFN3Q9BTN0 628 aa11.27□□□□□ -0.61
BNIP3-202ENST00000540159 TRBV24-1A0A075B6N3 115 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 J3QW42 95 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 AMBPP02760 352 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 APELAP0DMC3 54 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 NDUFB7P17568 137 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 KITLGP21583 273 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 DLX1P56177 255 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms