RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 SMRP1Q8NCR6 262 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 TMEM101Q96IK0 257 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 CFHR5Q9BXR6 569 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 ZNF71Q9NQZ8 489 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-233ENST00000532787 WBP1LQ9NX94 342 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 F11RQ9Y624 299 aaKnown RBP6.49□□□□□ -1.37
CTNND1-233ENST00000532787 SPCS1Q9Y6A9 102 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 LY75O60449 1722 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 TRBV20OR9-2A0A075B6H5 130 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 SIGLEC5O15389 551 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 PAX1P15863 534 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 FXYD3Q14802 87 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 TBR1Q16650 682 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 LINC01559Q495D7 138 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 HCP5Q6MZN7 132 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 FAM159AQ6UWV7 190 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 ABHD12Q8N2K0 398 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 CIARTQ8N365 385 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-233ENST00000532787 DRAM1Q8N682 238 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 RNASEH2CQ8TDP1 164 aaKnown RBP6.49□□□□□ -1.37
CTNND1-233ENST00000532787 NPCDR1Q9BY65 106 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 FSCN3Q9NQT6 498 aa6.49□□□□□ -1.37
CTNND1-233ENST00000532787 PPIAL4CA0A0B4J2A2 164 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 TYMSP04818 313 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 PPIAL4GP0DN37 164 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 ASPHD2Q6ICH7 369 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 OR13C6PQ8NH95 151 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 RGPD4Q7Z3J3 1758 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 IZUMO1RA6ND01 250 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 SNAI3Q3KNW1 292 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 IFI27L2Q9H2X8 130 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 BEX4Q9NWD9 120 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 SRP19P09132 144 aaKnown RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 HOXA5P20719 270 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 UCP1P25874 307 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 OTX1P32242 354 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 GFRA1P56159 465 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 CCL8P80075 99 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 BEND2Q8NDZ0 799 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 SCARF2Q96GP6 870 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 RCC1LQ96I51 464 aaKnown RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 SMOC1Q9H4F8 434 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 R4GN57 208 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 TAF1P21675 1872 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 LDLRAD4O15165 306 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 APELAP0DMC3 54 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 ASIPP42127 132 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 CSRP3P50461 194 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 LDLRAD2Q5SZI1 272 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 KLF14Q8TD94 323 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 SDHCQ99643 169 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 MRPL16Q9NX20 251 aaKnown RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 HILPDAQ9Y5L2 63 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 MYH14Q7Z406 1995 aaKnown RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 IGKV1D-42A0A075B6H8 117 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 SYNGR3O43761 229 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 C1orf162Q8NEQ5 155 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 OR4X2Q8NGF9 303 aa6.48□□□□□ -1.37
CTNND1-233ENST00000532787 RPP21Q9H633 154 aaKnown RBP6.48□□□□□ -1.37
CTNND1-233ENST00000532787 A0A1B0GUT8 65 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 B9A039 149 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 ZNF56Q15929 161 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 SLC25A53Q5H9E4 307 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 GOLT1AQ6ZVE7 132 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 LINC00305Q7Z4B0 112 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 BIVMQ86UB2 503 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 NEU1Q99519 415 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 DNAJC13O75165 2243 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 LOC105371242A0A075B767 164 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 TRAV8-2A0A0B4J237 113 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 PEX7O00628 323 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 KLF4O43474 513 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 FOXH1O75593 365 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 IMMP2LQ96T52 175 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 CDK5RAP2Q96SN8 1893 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 MBNL2Q5VZF2 373 aaKnown RBP6.47□□□□□ -1.37
CTNND1-233ENST00000532787 C19orf48Q6RUI8 117 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 ATOH7Q8N100 152 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 C5orf30Q96GV9 206 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 DUX5Q96PT3 197 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 TIMP4Q99727 224 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 SDF2L1Q9HCN8 221 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 RNF115Q9Y4L5 304 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 RBMY1BA6NDE4 496 aaKnown RBP6.47□□□□□ -1.37
CTNND1-233ENST00000532787 RBMY1EA6NEQ0 496 aaKnown RBP6.47□□□□□ -1.37
CTNND1-233ENST00000532787 RRHO14718 337 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 RBMY1DP0C7P1 496 aaKnown RBP6.47□□□□□ -1.37
CTNND1-233ENST00000532787 RBMY1A1P0DJD3 496 aaKnown RBP6.47□□□□□ -1.37
CTNND1-233ENST00000532787 RBMY1CP0DJD4 496 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 SRSF5Q13243 272 aaKnown RBP6.47□□□□□ -1.37
CTNND1-233ENST00000532787 TPRX1Q8N7U7 411 aa6.47□□□□□ -1.37
CTNND1-233ENST00000532787 PDLIM4P50479 330 aa6.46□□□□□ -1.37
CTNND1-233ENST00000532787 PRR7Q8TB68 274 aa6.46□□□□□ -1.37
CTNND1-233ENST00000532787 SLC25A2Q9BXI2 301 aa6.46□□□□□ -1.37
CTNND1-233ENST00000532787 FBLN5Q9UBX5 448 aa6.46□□□□□ -1.37
CTNND1-233ENST00000532787 TBL2Q9Y4P3 447 aaKnown RBP6.46□□□□□ -1.37
CTNND1-233ENST00000532787 PLAUP00749 431 aa6.46□□□□□ -1.37
CTNND1-233ENST00000532787 MPZP25189 248 aa6.46□□□□□ -1.37
CTNND1-233ENST00000532787 NUTF2P61970 127 aaKnown RBP6.46□□□□□ -1.37
CTNND1-233ENST00000532787 TEX45Q8NA69 505 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 500.9 ms