RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 C11orf94C9JXX5 98 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 K7EM74 188 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 PPP1R2P9O14990 202 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 GNG4P50150 75 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 SLC35B1P78383 322 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 LY6EQ16553 131 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 ZNF660Q6AZW8 331 aaPredicted RBP12.59□□□□□ -0.39
USP47-207ENST00000527733 A0A1W2PPQ1 181 aa12.58□□□□□ -0.39
USP47-207ENST00000527733 NAPSAO96009 420 aa12.58□□□□□ -0.39
USP47-207ENST00000527733 SELLP14151 372 aa12.58□□□□□ -0.39
USP47-207ENST00000527733 SULT1A2P50226 295 aa12.58□□□□□ -0.39
USP47-207ENST00000527733 KIAA0141Q14154 515 aaPredicted RBP12.58□□□□□ -0.39
USP47-207ENST00000527733 FXYD3Q14802 87 aa12.58□□□□□ -0.39
USP47-207ENST00000527733 C3orf36Q3SXR2 165 aa12.58□□□□□ -0.39
USP47-207ENST00000527733 TMEM88Q6PEY1 159 aa12.58□□□□□ -0.39
USP47-207ENST00000527733 BAGE3Q86Y29 109 aa12.58□□□□□ -0.39
USP47-207ENST00000527733 BAGE2Q86Y30 109 aa12.58□□□□□ -0.39
USP47-207ENST00000527733 MRPL20Q9BYC9 149 aaKnown RBP12.58□□□□□ -0.39
USP47-207ENST00000527733 A0A0B4J293 547 aa12.58□□□□□ -0.4
USP47-207ENST00000527733 CXorf1O96002 111 aa12.58□□□□□ -0.4
USP47-207ENST00000527733 TGFAP01135 160 aa12.58□□□□□ -0.4
USP47-207ENST00000527733 RND2P52198 227 aa12.58□□□□□ -0.4
USP47-207ENST00000527733 SIGIRRQ6IA17 410 aa12.58□□□□□ -0.4
USP47-207ENST00000527733 P2RX4Q99571 388 aa12.58□□□□□ -0.4
USP47-207ENST00000527733 TMEM56-RWDD3S4R434 201 aa12.58□□□□□ -0.4
USP47-207ENST00000527733 CHEK1O14757 476 aa12.58□□□□□ -0.4
USP47-207ENST00000527733 ASCL4Q6XD76 172 aa12.58□□□□□ -0.4
USP47-207ENST00000527733 MYPOPQ86VE0 399 aaPredicted RBP12.58□□□□□ -0.4
USP47-207ENST00000527733 PTPRQQ9UMZ3 2332 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 MUC22E2RYF6 1773 aaPredicted RBP12.57□□□□□ -0.4
USP47-207ENST00000527733 TGOLN2O43493 480 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 OR4A47Q6IF82 309 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 OR4A5Q8NH83 315 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 SLX1AQ9BQ83 275 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 CRIM1Q9NZV1 1036 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 SAA2-SAA4A0A096LPE2 208 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 LINC00869P0C866 280 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 SAA2P0DJI9 122 aaPredicted RBP12.57□□□□□ -0.4
USP47-207ENST00000527733 CLEC12BQ2HXU8 276 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 ZNF324BQ6AW86 544 aaPredicted RBP12.57□□□□□ -0.4
USP47-207ENST00000527733 WDFY1Q8IWB7 410 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 ZNF430Q9H8G1 570 aaPredicted RBP12.57□□□□□ -0.4
USP47-207ENST00000527733 AUP1Q9Y679 476 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 NPIPB11E5RHQ5 1161 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 E7EQL1 145 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 CD177Q8N6Q3 437 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 RPUSD1Q9UJJ7 312 aaKnown RBP12.57□□□□□ -0.4
USP47-207ENST00000527733 HIGD1AQ9Y241 93 aa12.57□□□□□ -0.4
USP47-207ENST00000527733 PAGE4O60829 102 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 CLN5O75503 358 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 KHDC3LQ587J8 217 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 ANGPTL6Q8NI99 470 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 TCEAL7Q9BRU2 100 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 CTDSP1Q9GZU7 261 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 FBXL15Q9H469 300 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 TMEM218A2RU14 115 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 ZNF705FA8MVS1 300 aaPredicted RBP12.56□□□□□ -0.4
USP47-207ENST00000527733 ZNF705DP0CH99 300 aaPredicted RBP12.56□□□□□ -0.4
USP47-207ENST00000527733 ZNF705BP0CI00 300 aaPredicted RBP12.56□□□□□ -0.4
USP47-207ENST00000527733 EGR1P18146 543 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 PAX5Q02548 391 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 C2orf68Q2NKX9 166 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 RBM14Q96PK6 669 aaKnown RBP12.56□□□□□ -0.4
USP47-207ENST00000527733 RSPO1Q2MKA7 263 aaPredicted RBP12.56□□□□□ -0.4
USP47-207ENST00000527733 C16orf82Q7Z2V1 217 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 MFAP4P55083 255 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 LHFPL1Q86WI0 220 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 NEUROG1Q92886 237 aa12.56□□□□□ -0.4
USP47-207ENST00000527733 LINC00862A6NCI5 91 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 ZNF503-AS2A6NEH8 195 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 CLDN34H7C241 214 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 HLA-DRB5Q30154 266 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 SPG11Q96JI7 2443 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 SMAD7O15105 426 aaKnown RBP12.55□□□□□ -0.4
USP47-207ENST00000527733 IGKV1D-33P01593 117 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 IGKV1-33P01594 117 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 S100A4P26447 101 aaKnown RBP12.55□□□□□ -0.4
USP47-207ENST00000527733 CFPP27918 469 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 LOXL3P58215 753 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 HEPN1Q6WQI6 88 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 FAM216AQ8WUB2 273 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 RBFOX2O43251 390 aaKnown RBP eCLIP12.55□□□□□ -0.49e-7■■■□□ 18.8
USP47-207ENST00000527733 SCO1O75880 301 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 REG1AP05451 166 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 PNRC1Q12796 327 aaPredicted RBP12.55□□□□□ -0.4
USP47-207ENST00000527733 Q6P435 159 aa12.55□□□□□ -0.4
USP47-207ENST00000527733 WDR61Q9GZS3 305 aaKnown RBP12.55□□□□□ -0.4
USP47-207ENST00000527733 C1QL1O75973 258 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 S100A8P05109 93 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 NDUFA6P56556 154 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 IGLV1-44P01699 117 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 NMBP08949 121 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 MIC13Q5XKP0 118 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 SLC16A13Q7RTY0 426 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 MPTX1A8MV57 137 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 STPG2Q8N412 459 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 TNFRSF14Q92956 283 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
USP47-207ENST00000527733 TRBV6-6A0A0A6YYG2 114 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms