RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SPTBN1Q01082 2364 aaKnown RBP2.54□□□□□ -2
CD44-219ENST00000525685 HRNRQ86YZ3 2850 aaPredicted RBP2.54□□□□□ -2
CD44-219ENST00000525685 PDZD2O15018 2839 aa2.54□□□□□ -2
CD44-219ENST00000525685 TEP1Q99973 2627 aaKnown RBP2.54□□□□□ -2
CD44-219ENST00000525685 HECTD1Q9ULT8 2610 aa2.54□□□□□ -2
CD44-219ENST00000525685 IGKV1D-8A0A087WSZ0 117 aa2.54□□□□□ -2
CD44-219ENST00000525685 SMIM31A0A1B0GVY4 71 aa2.54□□□□□ -2
CD44-219ENST00000525685 TMEM269A0A1B0GVZ9 245 aa2.54□□□□□ -2
CD44-219ENST00000525685 A0A1W2PPV4 95 aa2.54□□□□□ -2
CD44-219ENST00000525685 A0A1W2PQL4 384 aaPredicted RBP2.54□□□□□ -2
CD44-219ENST00000525685 GGT3PA6NGU5 568 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR2AT4A6NND4 320 aa2.54□□□□□ -2
CD44-219ENST00000525685 CD300LBA8K4G0 201 aa2.54□□□□□ -2
CD44-219ENST00000525685 IQCF6A8MYZ5 107 aa2.54□□□□□ -2
CD44-219ENST00000525685 F5H5P2 479 aa2.54□□□□□ -2
CD44-219ENST00000525685 LYNX1G3V0Z9 82 aa2.54□□□□□ -2
CD44-219ENST00000525685 PANO1I0J062 215 aa2.54□□□□□ -2
CD44-219ENST00000525685 J3QRE1 110 aa2.54□□□□□ -2
CD44-219ENST00000525685 NUPL2O15504 423 aaKnown RBP2.54□□□□□ -2
CD44-219ENST00000525685 XRCC2O43543 280 aa2.54□□□□□ -2
CD44-219ENST00000525685 MPZL2O60487 215 aa2.54□□□□□ -2
CD44-219ENST00000525685 RP2O75695 350 aa2.54□□□□□ -2
CD44-219ENST00000525685 TTRP02766 147 aa2.54□□□□□ -2
CD44-219ENST00000525685 HLA-DPB1P04440 258 aa2.54□□□□□ -2
CD44-219ENST00000525685 ERCC1P07992 297 aaPredicted RBP2.54□□□□□ -2
CD44-219ENST00000525685 LINC00614P0C842 121 aa2.54□□□□□ -2
CD44-219ENST00000525685 LYNX1P0DP58 116 aa2.54□□□□□ -2
CD44-219ENST00000525685 PSG2P11465 335 aa2.54□□□□□ -2
CD44-219ENST00000525685 CD99P14209 185 aa2.54□□□□□ -2
CD44-219ENST00000525685 SLC25A16P16260 332 aa2.54□□□□□ -2
CD44-219ENST00000525685 CD36P16671 472 aa2.54□□□□□ -2
CD44-219ENST00000525685 DTYMKP23919 212 aa2.54□□□□□ -2
CD44-219ENST00000525685 COL8A2P25067 703 aa2.54□□□□□ -2
CD44-219ENST00000525685 S100PP25815 95 aa2.54□□□□□ -2
CD44-219ENST00000525685 CTRLP40313 264 aa2.54□□□□□ -2
CD44-219ENST00000525685 CD200P41217 278 aa2.54□□□□□ -2
CD44-219ENST00000525685 KCNJ3P48549 501 aa2.54□□□□□ -2
CD44-219ENST00000525685 EIF2B2P49770 351 aaKnown RBP2.54□□□□□ -2
CD44-219ENST00000525685 RAB13P51153 203 aa2.54□□□□□ -2
CD44-219ENST00000525685 EFNB2P52799 333 aa2.54□□□□□ -2
CD44-219ENST00000525685 UBE2G2P60604 165 aa2.54□□□□□ -2
CD44-219ENST00000525685 CCL8P80075 99 aa2.54□□□□□ -2
CD44-219ENST00000525685 TNFAIP6P98066 277 aaPredicted RBP2.54□□□□□ -2
CD44-219ENST00000525685 FAM3AP98173 230 aa2.54□□□□□ -2
CD44-219ENST00000525685 MADCAM1Q13477 382 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR8B8Q15620 311 aa2.54□□□□□ -2
CD44-219ENST00000525685 KCNJ8Q15842 424 aa2.54□□□□□ -2
CD44-219ENST00000525685 ZNF684Q5T5D7 378 aa2.54□□□□□ -2
CD44-219ENST00000525685 AVPI1Q5T686 147 aa2.54□□□□□ -2
CD44-219ENST00000525685 GPR157Q5UAW9 335 aa2.54□□□□□ -2
CD44-219ENST00000525685 GPR107Q5VW38 600 aa2.54□□□□□ -2
CD44-219ENST00000525685 PRAMEF6Q5VXH4 476 aa2.54□□□□□ -2
CD44-219ENST00000525685 LAIR2Q6ISS4 152 aa2.54□□□□□ -2
CD44-219ENST00000525685 WDR86Q86TI4 376 aa2.54□□□□□ -2
CD44-219ENST00000525685 FAM58AQ8N1B3 248 aa2.54□□□□□ -2
CD44-219ENST00000525685 Q8N9L7 120 aa2.54□□□□□ -2
CD44-219ENST00000525685 NKAPP1Q8N9T2 125 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR8G5Q8NG78 346 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR2Z1Q8NG97 314 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR2D3Q8NGH3 330 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR52H1Q8NGJ2 320 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR5D18Q8NGL1 313 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR2T27Q8NH04 317 aa2.54□□□□□ -2
CD44-219ENST00000525685 GLYATL2Q8WU03 294 aa2.54□□□□□ -2
CD44-219ENST00000525685 ASB17Q8WXJ9 295 aa2.54□□□□□ -2
CD44-219ENST00000525685 Q96MT0 163 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR2V2Q96R30 315 aa2.54□□□□□ -2
CD44-219ENST00000525685 APOL4Q9BPW4 351 aa2.54□□□□□ -2
CD44-219ENST00000525685 ZNF649Q9BS31 505 aa2.54□□□□□ -2
CD44-219ENST00000525685 ADAT1Q9BUB4 502 aaKnown RBP2.54□□□□□ -2
CD44-219ENST00000525685 MROQ9BYG7 248 aa2.54□□□□□ -2
CD44-219ENST00000525685 REG4Q9BYZ8 158 aa2.54□□□□□ -2
CD44-219ENST00000525685 SLC25A39Q9BZJ4 359 aaPredicted RBP2.54□□□□□ -2
CD44-219ENST00000525685 FGF23Q9GZV9 251 aaPredicted RBP2.54□□□□□ -2
CD44-219ENST00000525685 PBOV1Q9GZY1 135 aa2.54□□□□□ -2
CD44-219ENST00000525685 RNF167Q9H6Y7 350 aa2.54□□□□□ -2
CD44-219ENST00000525685 FN3KRPQ9HA64 309 aa2.54□□□□□ -2
CD44-219ENST00000525685 OR52A1Q9UKL2 312 aa2.54□□□□□ -2
CD44-219ENST00000525685 NUBP2Q9Y5Y2 271 aa2.54□□□□□ -2
CD44-219ENST00000525685 TMEM14AQ9Y6G1 99 aa2.54□□□□□ -2
CD44-219ENST00000525685 R4GMQ9 66 aa2.54□□□□□ -2
CD44-219ENST00000525685 ANKHD1Q8IWZ3 2542 aaKnown RBP2.54□□□□□ -2
CD44-219ENST00000525685 SPTAN1Q13813 2472 aaKnown RBP2.54□□□□□ -2
CD44-219ENST00000525685 RP1L1Q8IWN7 2480 aaPredicted RBP2.54□□□□□ -2
CD44-219ENST00000525685 ALPK2Q86TB3 2170 aa2.54□□□□□ -2
CD44-219ENST00000525685 CR1P17927 2039 aa2.54□□□□□ -2
CD44-219ENST00000525685 UTP20O75691 2785 aaKnown RBP2.54□□□□□ -2
CD44-219ENST00000525685 ABCA4P78363 2273 aa2.53□□□□□ -2
CD44-219ENST00000525685 ARFGEF3Q5TH69 2177 aa2.53□□□□□ -2
CD44-219ENST00000525685 TRAV25A0A0B4J276 109 aa2.53□□□□□ -2
CD44-219ENST00000525685 IGHV1-69-2A0A0G2JMI3 117 aa2.53□□□□□ -2
CD44-219ENST00000525685 IGHV3-64DA0A0J9YX35 117 aa2.53□□□□□ -2
CD44-219ENST00000525685 ZNF816-ZNF321PA0A0X1KG74 233 aa2.53□□□□□ -2
CD44-219ENST00000525685 A0A1B0GTI1 187 aa2.53□□□□□ -2
CD44-219ENST00000525685 LOC107986453A0A1B0GWG9 222 aa2.53□□□□□ -2
CD44-219ENST00000525685 DAPL1A0PJW8 107 aa2.53□□□□□ -2
CD44-219ENST00000525685 RBMY1BA6NDE4 496 aaKnown RBP2.53□□□□□ -2
CD44-219ENST00000525685 RBMY1EA6NEQ0 496 aaKnown RBP2.53□□□□□ -2
CD44-219ENST00000525685 METTL15A6NJ78 407 aa2.53□□□□□ -2
CD44-219ENST00000525685 ZNF850A8MQ14 1090 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms