RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 FFAR4Q5NUL3 377 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 TMEM108Q6UXF1 575 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 MOGAT3Q86VF5 341 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 NEIL1Q96FI4 390 aaPredicted RBP9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 COQ2Q96H96 371 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 ELOVL5Q9NYP7 299 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 DCHS2Q6V1P9 2916 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 TRGV8A0A0C4DH27 118 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 TSTD3H0UI37 97 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 PDE6DO43924 150 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 HRASP01112 189 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 CD99P14209 185 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 G6PCP35575 357 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 GALR1P47211 349 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 GABRA2P47869 451 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 HTD2P86397 168 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 RBPJQ06330 500 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 BSPH1Q075Z2 132 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 FAM53AQ6NSI3 398 aaPredicted RBP9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 ACSM6Q6P461 480 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 KCNIP4Q6PIL6 250 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 GCSAMQ8N6F7 178 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 CD177Q8N6Q3 437 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 OR51G1Q8NGK1 321 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 OR1L1Q8NH94 360 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 ITLN1Q8WWA0 313 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 RAB1CQ92928 201 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 MEGF10Q96KG7 1140 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 PACRGQ96M98 296 aaPredicted RBP9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 COL6A6A6NMZ7 2263 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 IGKV1D-17A0A075B6S4 117 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 IGHV3OR15-7A0A075B7D8 119 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 DPRXA6NFQ7 191 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 SRRM5B3KS81 715 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 IGKV1D-33P01593 117 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 IGKV1-33P01594 117 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 PRB1P04280 392 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 LCN2P80188 198 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 AARDQ4LEZ3 155 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 OR4F5Q8NH21 305 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 OR4X1Q8NH49 305 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 RND1Q92730 232 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 OR4F4Q96R69 305 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 IMMP2LQ96T52 175 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 SSX3Q99909 188 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 NPCDR1Q9BY65 106 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 PARLQ9H300 379 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 PKDREJQ9NTG1 2253 aa9.13□□□□□ -0.95
SH3RF1-203ENST00000508685 F6UZH7 168 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 SPINT2O43291 252 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 RAMP3O60896 148 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 S1PR2O95136 353 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 TYMSP04818 313 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 FABP4P15090 132 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 SSTR5P35346 364 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 ZNF816Q0VGE8 651 aaPredicted RBP9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 FAM201AQ5SY85 155 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 OR52L2PQ8NGH6 319 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 OR52E5Q8NH55 327 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 MRGPRDQ8TDS7 321 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 RAB24Q969Q5 203 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 PRDM13Q9H4Q3 707 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 CHODLQ9H9P2 273 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 GGCTO75223 188 aaKnown RBP9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 IGHV1-46P01743 117 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 PRDX2P32119 198 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 RPL30P62888 115 aaKnown RBP9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 EDDM3AQ14507 147 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 JOSD1Q15040 202 aaPredicted RBP9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 ZNF843Q8N446 348 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 OR2T10Q8NGZ9 312 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 OR1P1Q8NH06 330 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 TMEM170AQ8WVE7 144 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 RPUSD4Q96CM3 377 aaKnown RBP9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 WFIKKN1Q96NZ8 548 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 HIST1H2BLQ99880 126 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 VKORC1Q9BQB6 163 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 SLC25A22Q9H936 323 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 KCNIP2Q9NS61 270 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 CLN8Q9UBY8 286 aa9.12□□□□□ -0.95
SH3RF1-203ENST00000508685 ANKHD1Q8IWZ3 2542 aaKnown RBP9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 C17orf98A8MV24 154 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 ZG16O60844 167 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 RBMXL2O75526 392 aaKnown RBP9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 HPRT1P00492 218 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 GCGP01275 180 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 GZMHP20718 246 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 CDC34P49427 236 aaPredicted RBP9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 PDLIM4P50479 330 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 SELENOVP59797 346 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 GFI1BQ5VTD9 330 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 FAM90A1Q86YD7 464 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 ZCCHC24Q8N2G6 241 aaKnown RBP9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 ZNRF1Q8ND25 227 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 NUP37Q8NFH4 326 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 OR13A1Q8NGR1 328 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 PPP1R35Q8TAP8 253 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 DCTN5Q9BTE1 182 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms