RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ZNF491Q8N8L2 437 aa14.2□□□□□ -0.14
PDLIM7-216ENST00000506537 TMEM167AQ8TBQ9 72 aa14.2□□□□□ -0.14
PDLIM7-216ENST00000506537 SRSF12Q8WXF0 261 aaKnown RBP14.2□□□□□ -0.14
PDLIM7-216ENST00000506537 GNB4Q9HAV0 340 aa14.2□□□□□ -0.14
PDLIM7-216ENST00000506537 SLC2A9Q9NRM0 540 aa14.2□□□□□ -0.14
PDLIM7-216ENST00000506537 NDUFA13Q9P0J0 144 aa14.2□□□□□ -0.14
PDLIM7-216ENST00000506537 ANKRD20A5PA0PJZ0 165 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 PF4P02776 101 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 APELAP0DMC3 54 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 PI3P19957 117 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 S100A5P33763 92 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 DEFB136Q30KP8 78 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 TMEM65Q6PI78 240 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 TBC1D26Q86UD7 250 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 POC5Q8NA72 575 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 OR5M8Q8NGP6 311 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 VSTM2AQ8TAG5 236 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 CD300LFQ8TDQ1 290 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 TRIM63Q969Q1 353 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 RAX2Q96IS3 184 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 DUX3Q96PT4 197 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 PLEKHA2Q9HB19 425 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 COMMD9Q9P000 198 aa14.19□□□□□ -0.14
PDLIM7-216ENST00000506537 A0A1B0GW64 132 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 MSGN1A6NI15 193 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 CREBL2O60519 120 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 IL6RP08887 468 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 AKAIN1P0CW23 69 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 MYOD1P15172 320 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 PGAM2P15259 253 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 NQO2P16083 231 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 SLC6A1P30531 599 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 MEF2DQ14814 521 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 SCGB2B2Q4G0G5 96 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 LINC00482Q8N8I6 264 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 OR5T1Q8NG75 326 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 OR6Q1Q8NGQ2 317 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 TERB2Q8NHR7 220 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 C4orf3Q8WVX3 66 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 UBE2E2Q96LR5 201 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 BET1LQ9NYM9 111 aa14.18□□□□□ -0.14
PDLIM7-216ENST00000506537 TRAV3A0A0B4J244 114 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 E7EUB6 86 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 RPA2P15927 270 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 LPAR6P43657 344 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 RND3P61587 244 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 PYDC2Q56P42 97 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 MRPL41Q8IXM3 137 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 WFDC9Q8NEX5 89 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 OR13C8Q8NGS7 320 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 MARCH1Q8TCQ1 289 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 ZNF486Q96H40 463 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 MS4A10Q96PG2 267 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 P2RX4Q99571 388 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 THAP7Q9BT49 309 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 TMEM140Q9NV12 185 aa14.17□□□□□ -0.14
PDLIM7-216ENST00000506537 TEX22C9J3V5 150 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 G3V4G9 280 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 I3L521 148 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 ACTL6BO94805 426 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 ETV6P41212 452 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 C1QL4Q86Z23 238 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 Q8N402 240 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 OR4A5Q8NH83 315 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 OR5B12Q96R08 314 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 PHB2Q99623 299 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 HRASLSQ9HDD0 168 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 VSIG4Q9Y279 399 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 NOTCH3Q9UM47 2321 aa14.16□□□□□ -0.14
PDLIM7-216ENST00000506537 MARCH11A6NNE9 402 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 DISC1C4P0D8 188 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 CCL24O00175 119 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 UPK2O00526 184 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 MPPED1O15442 326 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 IGKV1-39P01597 117 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 IGKV1D-39P04432 117 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 PTBP1P26599 531 aaKnown RBP eCLIP14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 S100GP29377 79 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 MAS1LP35410 378 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 MYCNOSP40205 109 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 PIGPP57054 158 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 TPPP2P59282 170 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 RPL8P62917 257 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 KLF9Q13886 244 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 SAMD5Q5TGI4 173 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 ADAD2Q8NCV1 583 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 DMBX1Q8NFW5 382 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 OR51S1Q8NGJ8 323 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 TMEM68Q96MH6 324 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 AIFM2Q9BRQ8 373 aa14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 ALX4Q9H161 411 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 FAM212BQ9NTI7 297 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-216ENST00000506537 HMX3A6NHT5 357 aa14.14□□□□□ -0.15
PDLIM7-216ENST00000506537 CGB1A6NKQ9 187 aa14.14□□□□□ -0.15
PDLIM7-216ENST00000506537 H3BUA1 57 aa14.14□□□□□ -0.15
PDLIM7-216ENST00000506537 RBMXL2O75526 392 aaKnown RBP14.14□□□□□ -0.15
PDLIM7-216ENST00000506537 TRGV3P03979 118 aa14.14□□□□□ -0.15
PDLIM7-216ENST00000506537 HLA-GP17693 338 aa14.14□□□□□ -0.15
PDLIM7-216ENST00000506537 CD33P20138 364 aa14.14□□□□□ -0.15
PDLIM7-216ENST00000506537 G6PCP35575 357 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms