RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 OR1J4Q8NGS1 313 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 TM2D3Q9BRN9 247 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 PBOV1Q9GZY1 135 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 AKAP11Q9UKA4 1901 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 DSCAMO60469 2012 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 IGHG2P01859 326 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 GZMBP10144 247 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 CRISP2P16562 243 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 OR10J1P30954 320 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 SYNJ2BPP57105 145 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 GLYATQ6IB77 296 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 Q6Q795 121 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 CSNK1G2-AS1Q8NCQ2 148 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 OR4K5Q8NGD3 323 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 RPL36ALQ969Q0 106 aaKnown RBP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 TIMM17AQ99595 171 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 SLC25A21Q9BQT8 299 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 NUP205Q92621 2012 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 C1orf196B1AJZ1 125 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 K7EPK0 472 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 OR2T1O43869 369 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 COX7A1P24310 79 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 CYCSP99999 105 aaKnown RBP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF497Q6ZNH5 498 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 ADM2Q7Z4H4 148 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 PRIMA1Q86XR5 153 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 CTAGE3PQ8IX95 158 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 RNF175Q8N4F7 328 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 OR10D4PQ8NGN7 298 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 MALSU1Q96EH3 234 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 AICDAQ9GZX7 198 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 EFCAB1Q9HAE3 211 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 BOKQ9UMX3 212 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 CECR2Q9BXF3 1484 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 A0A0J9YXY3 114 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF705GA8MUZ8 300 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 KRBOX1C9JBD0 128 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF670-ZNF695F2Z2N8 137 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 RPS11P62280 158 aaKnown RBP eCLIP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 HBA1P69905 142 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 LOXL1Q08397 574 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 HSD17B13Q7Z5P4 300 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 C3orf22Q8N5N4 141 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 OR11G2Q8NGC1 345 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 RBPMSQ93062 196 aaKnown RBP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 GNPNAT1Q96EK6 184 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-204ENST00000504430 CBLN4Q9NTU7 201 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 DSCAML1Q8TD84 2053 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 WDR62O43379 1518 aa3.83□□□□□ -1.8
NIPBL-204ENST00000504430 MED23Q9ULK4 1368 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 A0A0J9YW62 118 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 TMEM212A6NML5 194 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 DNASE2O00115 360 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-204ENST00000504430 IGKV1-39P01597 117 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 IGKV1D-39P04432 117 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 CXCL1P09341 107 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 CTSEP14091 401 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF823P16415 610 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 CRYBB3P26998 211 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 MRPS10P82664 201 aaKnown RBP3.82□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF695Q8IW36 515 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 PSMG3Q9BT73 122 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-204ENST00000504430 FGF23Q9GZV9 251 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-204ENST00000504430 SCN9AQ15858 1988 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 REREQ9P2R6 1566 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF407Q9C0G0 2248 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF609O15014 1411 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF728P0DKX0 622 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 BCL2P10415 239 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 CMC4P56277 68 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-204ENST00000504430 BTG2P78543 158 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 RTL8BQ17RB0 113 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 LRP11Q86VZ4 500 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 PDPNQ86YL7 162 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 SDF2Q99470 211 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 CCL13Q99616 98 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 MGLLQ99685 303 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 RTL8AQ9BWD3 113 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF492Q9P255 531 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 CTSZQ9UBR2 303 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 TRBV20OR9-2A0A075B6H5 130 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 TRGC2P03986 189 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 SMIM10L2AP0DMW4 78 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 SMIM10L2BP0DMW5 78 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 ACVRL1P37023 503 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF80P51504 273 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-204ENST00000504430 LY6DQ14210 128 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 TCEAL5Q5H9L2 206 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 C8orf59Q8N0T1 100 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-204ENST00000504430 SLAMF6Q96DU3 332 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 NRIP2Q9BQI9 281 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 CELA1Q9UNI1 258 aa3.82□□□□□ -1.8
NIPBL-204ENST00000504430 DOCK8Q8NF50 2099 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 TMEM250H0YL14 139 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 H3BQF6 201 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 AIPO00170 330 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 LYZL6O75951 148 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 GABARAPO95166 117 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 NAPSAO96009 420 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 MAS1P04201 325 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms