RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	IGHV3-35	A0A0C4DH35	117 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	CGB1	A6NKQ9	187 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	RAB27B	O00194	218 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	CREBL2	O60519	120 aa	Predicted RBP	10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	ZNF735	P0CB33	412 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	HSMCR30	P0CW71	290 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	IGKV1-13	P0DP09	117 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	RPL27A	P46776	148 aa	Known RBP	10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	FABP5	Q01469	135 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	ZNF585B	Q52M93	769 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	KCTD9	Q7L273	389 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	PUSL1	Q8N0Z8	303 aa	Known RBP	10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	GPHA2	Q96T91	129 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161		V9GY05	133 aa		10.16	□□□□□ -0.78
SAMM50-204	ENST00000493161	DPPA5	A6NC42	116 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	ARL6IP5	O75915	188 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	KBTBD11	O94819	623 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	S1PR2	O95136	353 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	CLEC3B	P05452	202 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	CRYGC	P07315	174 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	C8orf88	P0DMB2	117 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	HIST1H1D	P16402	221 aa	Known RBP	10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	NFYA	P23511	347 aa	Predicted RBP	10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	PSMB6	P28072	239 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	BMI1	P35226	326 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	OR10A3	P58181	314 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	KLK9	Q2XQG4	91 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	ANKRD55	Q3KP44	614 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161		Q6ZWC4	215 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	ZNF645	Q8N7E2	425 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	OR1L6	Q8NGR2	347 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	TMEM167A	Q8TBQ9	72 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	EEF1AKMT3	Q96AZ1	226 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	OR2A7	Q96R45	310 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	C8orf4	Q9NR00	106 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	KLK9	Q9UKQ9	250 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	TP53TG1	Q9Y2A0	90 aa		10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	RBMX2	Q9Y388	322 aa	Known RBP	10.15	□□□□□ -0.78
SAMM50-204	ENST00000493161	CTRB1	P17538	263 aa		10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	ARFRP1	Q13795	201 aa		10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	CTRB2	Q6GPI1	263 aa		10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161		Q6ZS49	121 aa		10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	SSX9	Q7RTT3	188 aa		10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	OR2C3	Q8N628	320 aa		10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	RNF183	Q96D59	192 aa		10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	KLK5	Q9Y337	293 aa	Predicted RBP	10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	PRELID3B	Q9Y3B1	194 aa		10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	VPS13D	Q5THJ4	4388 aa		10.14	□□□□□ -0.79
SAMM50-204	ENST00000493161	IGLV11-55	A0A075B6I3	123 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	TRAV25	A0A0B4J276	109 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	HLA-DQB1	P01920	261 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	CRHBP	P24387	322 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	GADD45A	P24522	165 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	GPR183	P32249	361 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	APOC4	P55056	127 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	RCN1	Q15293	331 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	ODF3L2	Q3SX64	289 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	OGFRL1	Q5TC84	451 aa	Predicted RBP	10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	OR4A47	Q6IF82	309 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	SPATA2	Q9UM82	520 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	MRPS7	Q9Y2R9	242 aa	Known RBP	10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	OR2W1	Q9Y3N9	320 aa		10.13	□□□□□ -0.79
SAMM50-204	ENST00000493161	RPA2	P15927	270 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	RPL35A	P18077	110 aa	Known RBP	10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	FCGR2B	P31994	310 aa	Predicted RBP	10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	TALDO1	P37837	337 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	PSMD7	P51665	324 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	PRR20E	P86478	221 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	PRR20C	P86479	221 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	PRR20D	P86480	221 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	PRR20B	P86481	221 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	PRR20A	P86496	221 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	LGALS9C	Q6DKI2	356 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	ZNF502	Q8TBZ5	544 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	TCTEX1D2	Q8WW35	142 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	TAS2R8	Q9NYW2	309 aa		10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	MRPL27	Q9P0M9	148 aa	Known RBP	10.12	□□□□□ -0.79
SAMM50-204	ENST00000493161	TRBV7-1	A0A0A6YYK4	115 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	IFITM5	A6NNB3	132 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	DEFA4	P12838	97 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	HIST1H1B	P16401	226 aa	Known RBP	10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	CD36	P16671	472 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	ATF4	P18848	351 aa	Predicted RBP	10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	MAS1L	P35410	378 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	MAP2K4	P45985	399 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	RPL8	P62917	257 aa	Known RBP	10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	MLLT11	Q13015	90 aa	Predicted RBP	10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	TRAM1	Q15629	374 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	NR2C2AP	Q86WQ0	139 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	SLC38A6	Q8IZM9	456 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	MFSD4A	Q8N468	514 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	STPG3	Q8N7X2	389 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	OR4S2	Q8NH73	311 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	VSTM2A	Q8TAG5	236 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	MARC2	Q969Z3	335 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	SPAG8	Q99932	426 aa	Predicted RBP	10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	C5orf66	Q9H5L9	145 aa		10.11	□□□□□ -0.79

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