RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 SLC25A48Q6ZT89 311 aaKnown RBP13.93□□□□□ -0.18
FDPS-212ENST00000487002 ZNF383Q8NA42 475 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 LEAP2Q969E1 77 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 KCNIP2Q9NS61 270 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 RIF1Q5UIP0 2472 aaKnown RBP13.93□□□□□ -0.18
FDPS-212ENST00000487002 TRAV3A0A0B4J244 114 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 TRAV38-1A0A0B4J264 116 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 SMCO3A2RU48 225 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 KBTBD11O94819 623 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 THBDP07204 575 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 BSPH1Q075Z2 132 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 HNF4GQ14541 408 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 GAL3ST2Q9H3Q3 398 aa13.93□□□□□ -0.18
FDPS-212ENST00000487002 A0A1W2PPE3 182 aa13.92□□□□□ -0.18
FDPS-212ENST00000487002 CLDN34H7C241 214 aa13.92□□□□□ -0.18
FDPS-212ENST00000487002 HSPE1P61604 102 aaKnown RBP13.92□□□□□ -0.18
FDPS-212ENST00000487002 TREML4Q6UXN2 200 aa13.92□□□□□ -0.18
FDPS-212ENST00000487002 C1orf87Q8N0U7 546 aa13.92□□□□□ -0.18
FDPS-212ENST00000487002 SMIM7Q9BQ49 75 aa13.92□□□□□ -0.18
FDPS-212ENST00000487002 VSTM5A8MXK1 200 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 RRHO14718 337 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 RPS10P46783 165 aaKnown RBP13.91□□□□□ -0.18
FDPS-212ENST00000487002 MEOX2P50222 304 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 ERVFRD-1P60508 538 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 SPACA3Q8IXA5 215 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 C12orf57Q99622 126 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 AKAP13Q12802 2813 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 AP4M1O00189 453 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 TGOLN2O43493 480 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 EIF3GO75821 320 aaKnown RBP eCLIP13.91□□□□□ -0.18
FDPS-212ENST00000487002 CCL8P80075 99 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 TBR1Q16650 682 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 ZNF343Q6P1L6 599 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 OR13D1Q8NGV5 346 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 TCEAL7Q9BRU2 100 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 TMPRSS5Q9H3S3 457 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 PRNDQ9UKY0 176 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 ZNF257Q9Y2Q1 563 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 GVINP1Q7Z2Y8 2422 aa13.91□□□□□ -0.18
FDPS-212ENST00000487002 ATXN7O15265 892 aaPredicted RBP13.9□□□□□ -0.18
FDPS-212ENST00000487002 TMPRSS2O15393 492 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 IL6RP08887 468 aaPredicted RBP13.9□□□□□ -0.18
FDPS-212ENST00000487002 CXCL1P09341 107 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 RTL8BQ17RB0 113 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 SLC24A4Q8NFF2 622 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 TMEM170AQ8WVE7 144 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 ZCCHC14Q8WYQ9 949 aaKnown RBP13.9□□□□□ -0.18
FDPS-212ENST00000487002 ENY2Q9NPA8 101 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 NGBQ9NPG2 151 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 SLC25A10Q9UBX3 287 aaPredicted RBP13.9□□□□□ -0.18
FDPS-212ENST00000487002 CEP250Q9BV73 2442 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 FNDC10F2Z333 226 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 HMGB3O15347 200 aaKnown RBP13.9□□□□□ -0.18
FDPS-212ENST00000487002 OPN1MWP04001 364 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 SMIM6P0DI80 62 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 OPN1MW2P0DN77 364 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 OPN1MW3P0DN78 364 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 NPY1RP25929 384 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 GNG10P50151 68 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 FABP9Q0Z7S8 132 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 TMEM241Q24JQ0 296 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 LRFN3Q9BTN0 628 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 SAP30LQ9HAJ7 183 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 DCAF16Q9NXF7 216 aa13.9□□□□□ -0.18
FDPS-212ENST00000487002 LSM4Q9Y4Z0 139 aaKnown RBP13.9□□□□□ -0.18
FDPS-212ENST00000487002 ZFHX2Q9C0A1 2572 aaPredicted RBP13.89□□□□□ -0.19
FDPS-212ENST00000487002 NDUFB7P17568 137 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 RBPJQ06330 500 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 ZNF833PQ6ZTB9 187 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 TGIF2LYQ8IUE0 185 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 OR4F5Q8NH21 305 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 NEIL1Q96FI4 390 aaPredicted RBP13.89□□□□□ -0.19
FDPS-212ENST00000487002 OR4F4Q96R69 305 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 MGST2Q99735 147 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 GGTLC1Q9BX51 225 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 MS4A5Q9H3V2 200 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 NPVFQ9HCQ7 196 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 ZGRF1Q86YA3 2104 aa13.89□□□□□ -0.19
FDPS-212ENST00000487002 PPIAL4EA0A075B759 164 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 PPIAL4DF5H284 164 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 TMEM178BH3BS89 294 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 K7ENP7 123 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 MMP23AO75900 390 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 CT45A6P0DMU7 189 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 CT45A5P0DMU8 189 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 CT45A7P0DMV0 189 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 PPIAL4FP0DN26 164 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 ATP5IP56385 69 aaPredicted RBP13.88□□□□□ -0.19
FDPS-212ENST00000487002 ASCL5Q7RTU5 278 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 ABHD12Q8N2K0 398 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 PARLQ9H300 379 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 PPIAL4AQ9Y536 164 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 URGCP-MRPS24S4R325 110 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 MUC6Q6W4X9 2439 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 TRBV24-1A0A075B6N3 115 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 TGIF2-C20orf24A0A0A6YYL0 155 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 YIF1AO95070 293 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 RPL31P62899 125 aaKnown RBP13.88□□□□□ -0.19
FDPS-212ENST00000487002 ZNF674Q2M3X9 581 aa13.88□□□□□ -0.19
FDPS-212ENST00000487002 ZNF714Q96N38 554 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms