RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 RARRES2Q99969 163 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 TACC2O95359 2948 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 FAM90A9PA6NNJ1 464 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 PMS2P5A8MQ11 134 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 CT45A6P0DMU7 189 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 CT45A5P0DMU8 189 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 CT45A7P0DMV0 189 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 AGAP20933 346 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 AARDQ4LEZ3 155 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 ZNF841Q6ZN19 808 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 TAF15Q92804 592 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL9A3-205ENST00000466192 RPRMQ9NS64 109 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 RHOVQ96L33 236 aa14.91□□□□□ -0.02
COL9A3-205ENST00000466192 PSMG3Q9BT73 122 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-205ENST00000466192 USP24Q9UPU5 2620 aa14.91□□□□□ -0.02
COL9A3-205ENST00000466192 C19orf84I3L1E1 186 aa14.91□□□□□ -0.02
COL9A3-205ENST00000466192 RELBQ01201 579 aa14.91□□□□□ -0.02
COL9A3-205ENST00000466192 DPPA3Q6W0C5 159 aa14.91□□□□□ -0.02
COL9A3-205ENST00000466192 ZNF833PQ6ZTB9 187 aa14.91□□□□□ -0.02
COL9A3-205ENST00000466192 C11orf42Q8N5U0 333 aa14.91□□□□□ -0.02
COL9A3-205ENST00000466192 RALYQ9UKM9 306 aaKnown RBP14.91□□□□□ -0.02
COL9A3-205ENST00000466192 OR8U8P0C7N1 319 aa14.9□□□□□ -0.02
COL9A3-205ENST00000466192 SPCS3P61009 180 aa14.9□□□□□ -0.02
COL9A3-205ENST00000466192 PINX1Q96BK5 328 aaKnown RBP14.9□□□□□ -0.02
COL9A3-205ENST00000466192 PARD6GQ9BYG4 376 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-205ENST00000466192 KPTNQ9Y664 436 aa14.9□□□□□ -0.02
COL9A3-205ENST00000466192 TRBV23-1A0A0A0MS06 115 aa14.9□□□□□ -0.02
COL9A3-205ENST00000466192 BTBD17A6NE02 478 aa14.9□□□□□ -0.02
COL9A3-205ENST00000466192 PLA2G5P39877 138 aa14.9□□□□□ -0.02
COL9A3-205ENST00000466192 ELLP55199 621 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-205ENST00000466192 HAGHQ16775 308 aa14.9□□□□□ -0.02
COL9A3-205ENST00000466192 TMEM147Q9BVK8 224 aa14.9□□□□□ -0.02
COL9A3-205ENST00000466192 TNCP24821 2201 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 CACNA1BQ00975 2339 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 RBFOX3A6NFN3 312 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 C15orf62A8K5M9 175 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 CRYBA1P05813 215 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 SERF2P84101 59 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 ATP6V1FQ16864 119 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 SP5Q6BEB4 398 aaPredicted RBP14.89□□□□□ -0.03
COL9A3-205ENST00000466192 OR4A47Q6IF82 309 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 DTX2Q86UW9 622 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 KIAA1456Q9P272 454 aa14.89□□□□□ -0.03
COL9A3-205ENST00000466192 A0A1B0GW64 132 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 J3QR06 171 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 IGKV1-16P04430 117 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 OR13C7P0DN81 318 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 IGHV1-8P0DP01 117 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 ZNF596Q8TC21 504 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 RAB39BQ96DA2 213 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 SLC35B3Q9H1N7 401 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 A0A087X0M5 115 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 A0A1B0GX30 115 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 EIF3GO75821 320 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL9A3-205ENST00000466192 IFNA10P01566 189 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 AKIRIN2Q53H80 203 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 C8orf31Q8N9H6 132 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 OR52E5Q8NH55 327 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 MRPL20Q9BYC9 149 aaKnown RBP14.88□□□□□ -0.03
COL9A3-205ENST00000466192 HEYLQ9NQ87 328 aaPredicted RBP14.88□□□□□ -0.03
COL9A3-205ENST00000466192 SLC35D1Q9NTN3 355 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 ARHGAP32A7KAX9 2087 aa14.88□□□□□ -0.03
COL9A3-205ENST00000466192 HBE1P02100 147 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 PAX6P26367 422 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 RAB2AP61019 212 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 GNB2P62879 340 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 ZNF726P1Q15940 193 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 LINC00311Q8N616 119 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 NEU4Q8WWR8 484 aaPredicted RBP14.87□□□□□ -0.03
COL9A3-205ENST00000466192 CLCC1Q96S66 551 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 HIPK2Q9H2X6 1198 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 C15orf61A6NNL5 157 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 LINC00587B1AMM8 73 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 SMIM6P0DI80 62 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 FGF7P21781 194 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 DIAPH2-AS1Q14236 149 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 POU2AF1Q16633 256 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 LCN15Q6UWW0 184 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 SSX7Q7RTT5 188 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 ZNF429Q86V71 674 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 OR13D1Q8NGV5 346 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 OR10X1Q8NGY0 326 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 RXFP4Q8TDU9 374 aa14.87□□□□□ -0.03
COL9A3-205ENST00000466192 RCC1LQ96I51 464 aaKnown RBP14.87□□□□□ -0.03
COL9A3-205ENST00000466192 ARG1P05089 322 aa14.86□□□□□ -0.03
COL9A3-205ENST00000466192 FOLR2P14207 255 aa14.86□□□□□ -0.03
COL9A3-205ENST00000466192 VDAC2P45880 294 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-205ENST00000466192 REG1BP48304 166 aa14.86□□□□□ -0.03
COL9A3-205ENST00000466192 RTL8BQ17RB0 113 aa14.86□□□□□ -0.03
COL9A3-205ENST00000466192 PDLIM3Q53GG5 364 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-205ENST00000466192 TMEM41BQ5BJD5 291 aa14.86□□□□□ -0.03
COL9A3-205ENST00000466192 FAM209BQ5JX69 171 aa14.86□□□□□ -0.03
COL9A3-205ENST00000466192 C2CD4CQ8TF44 421 aa14.86□□□□□ -0.03
COL9A3-205ENST00000466192 TCF19Q9Y242 345 aa14.86□□□□□ -0.03
COL9A3-205ENST00000466192 SRRM4A7MD48 611 aaKnown RBP14.85□□□□□ -0.03
COL9A3-205ENST00000466192 HRASP01112 189 aa14.85□□□□□ -0.03
COL9A3-205ENST00000466192 FGF8P55075 233 aaPredicted RBP14.85□□□□□ -0.03
COL9A3-205ENST00000466192 DLX1P56177 255 aa14.85□□□□□ -0.03
COL9A3-205ENST00000466192 ETV3LQ6ZN32 361 aa14.85□□□□□ -0.03
COL9A3-205ENST00000466192 ABHD12Q8N2K0 398 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms