RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 OR11H12B2RN74 326 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 LGALS9O00182 355 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 SLC22A5O76082 557 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 JTBO76095 146 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 CTXN2P0C2S0 81 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 CD36P16671 472 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 EIF4EBP1Q13541 118 aaPredicted RBP11.15□□□□□ -0.62
RPS28-201ENST00000417088 GUCA2BQ16661 112 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 C22orf42Q6IC83 251 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 PUSL1Q8N0Z8 303 aaKnown RBP11.15□□□□□ -0.62
RPS28-201ENST00000417088 TMEM167AQ8TBQ9 72 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 WDR89Q96FK6 387 aaPredicted RBP11.15□□□□□ -0.62
RPS28-201ENST00000417088 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 OR2A7Q96R45 310 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 DCSTAMPQ9H295 470 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 TECRQ9NZ01 308 aaKnown RBP11.15□□□□□ -0.62
RPS28-201ENST00000417088 KBTBD11O94819 623 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 NDUFB8O95169 186 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 GALP22466 123 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 RPL27AP46776 148 aaKnown RBP11.14□□□□□ -0.63
RPS28-201ENST00000417088 BRWD1-AS2P59051 145 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 CNIH2Q6PI25 160 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 GPHB5Q86YW7 130 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 VSTM2AQ8TAG5 236 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 NUDCD2Q8WVJ2 157 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 CCDC140Q96MF4 163 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 FYTTD1Q96QD9 318 aaKnown RBP11.14□□□□□ -0.63
RPS28-201ENST00000417088 HSD17B10Q99714 261 aaKnown RBP11.14□□□□□ -0.63
RPS28-201ENST00000417088 SLC2A9Q9NRM0 540 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 SELENOKQ9Y6D0 94 aa11.14□□□□□ -0.63
RPS28-201ENST00000417088 DPPA5A6NC42 116 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 SSX5O60225 188 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 CRYGCP07315 174 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 ZNF735P0CB33 412 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 AREGP15514 252 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 CBLN1P23435 193 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 MAS1LP35410 378 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 KLK9Q2XQG4 91 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 CLEC19AQ6UXS0 136 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 MFSD4AQ8N468 514 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 OR4S2Q8NH73 311 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 TCTEX1D2Q8WW35 142 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 CACNG8Q8WXS5 425 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 KLK9Q9UKQ9 250 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 SPATA2Q9UM82 520 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 S4R3C0 116 aa11.13□□□□□ -0.63
RPS28-201ENST00000417088 TMEM235A6NFC5 223 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 NOTOA8MTQ0 251 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 PSMB6P28072 239 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 ARL3P36405 182 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 TMEM61Q8N0U2 210 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 CNBD2Q96M20 576 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 GPHA2Q96T91 129 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 TAS2R8Q9NYW2 309 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 ANXA10Q9UJ72 324 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 BLOC1S6Q9UL45 172 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 ALMS1Q8TCU4 4167 aa11.12□□□□□ -0.63
RPS28-201ENST00000417088 TMEM213A2RRL7 107 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 CGB1A6NKQ9 187 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 MYOD1P15172 320 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 CTRB1P17538 263 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 GNG2P59768 71 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 FAM106AQ4KMX7 169 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 ZNF57Q68EA5 555 aaPredicted RBP11.11□□□□□ -0.63
RPS28-201ENST00000417088 CTRB2Q6GPI1 263 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 IZUMO2Q6UXV1 221 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 ZNF66Q6ZN08 573 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 SSX9Q7RTT3 188 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 SLC16A13Q7RTY0 426 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 EEF1AKMT3Q96AZ1 226 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 MLXQ9UH92 298 aa11.11□□□□□ -0.63
RPS28-201ENST00000417088 ZNF320A2RRD8 509 aa11.1□□□□□ -0.63
RPS28-201ENST00000417088 A8MWP6 167 aa11.1□□□□□ -0.63
RPS28-201ENST00000417088 HRASP01112 189 aa11.1□□□□□ -0.63
RPS28-201ENST00000417088 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
RPS28-201ENST00000417088 FGF9P31371 208 aaPredicted RBP11.1□□□□□ -0.63
RPS28-201ENST00000417088 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
RPS28-201ENST00000417088 UXS1Q8NBZ7 420 aa11.1□□□□□ -0.63
RPS28-201ENST00000417088 TXNL4BQ9NX01 149 aaKnown RBP11.1□□□□□ -0.63
RPS28-201ENST00000417088 DAPK2Q9UIK4 370 aa11.1□□□□□ -0.63
RPS28-201ENST00000417088 IGLV11-55A0A075B6I3 123 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 SCGNO76038 276 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 DHFRP00374 187 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 REG1AP05451 166 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 HLA-GP17693 338 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 HSPA13P48723 471 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 UBE2UQ5VVX9 321 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 OR52B4Q8NGK2 314 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 OVOL2Q9BRP0 275 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 VCX3BQ9H321 246 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 CCL28Q9NRJ3 127 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 BET1LQ9NYM9 111 aa11.09□□□□□ -0.63
RPS28-201ENST00000417088 TRBV7-1A0A0A6YYK4 115 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 TNFSF12O43508 249 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 SCAF4O95104 1147 aaKnown RBP11.08□□□□□ -0.64
RPS28-201ENST00000417088 CLEC3BP05452 202 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 PTHLHP12272 177 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 DEFA4P12838 97 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms