RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 COLCA1Q6ZS62 124 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 ZNF439Q8NDP4 499 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 OR4X2Q8NGF9 303 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
LSS-202ENST00000397728 A0A1W2PRX2 142 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 A0A1W2PPQ1 181 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 KCNAB3O43448 404 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 OR2C1O95371 312 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 UCP3P55916 312 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 FAM166AQ6J272 317 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 NKX6-2Q9C056 277 aaPredicted RBP12.88□□□□□ -0.35
LSS-202ENST00000397728 ADAMTS9Q9P2N4 1935 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 IGKV1-12A0A0C4DH73 117 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 BMPR1BO00238 502 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 IGKV1D-12P01611 117 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 TNFRSF9Q07011 255 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 MYPOPQ86VE0 399 aaPredicted RBP12.88□□□□□ -0.35
LSS-202ENST00000397728 S4R3C0 116 aa12.88□□□□□ -0.35
LSS-202ENST00000397728 COL8A2P25067 703 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 SELENOTP62341 195 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 PNRC2Q9NPJ4 139 aaKnown RBP12.87□□□□□ -0.35
LSS-202ENST00000397728 ZNF705GA8MUZ8 300 aaPredicted RBP12.87□□□□□ -0.35
LSS-202ENST00000397728 RANP62826 216 aaKnown RBP12.87□□□□□ -0.35
LSS-202ENST00000397728 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 ETV2O00321 342 aaPredicted RBP12.87□□□□□ -0.35
LSS-202ENST00000397728 TP53RKQ96S44 253 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 SLX1AQ9BQ83 275 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 IGHV3OR16-13A0A075B7E8 117 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 IGHV3-74A0A0B4J1X5 117 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 MBPP02686 304 aaPredicted RBP12.87□□□□□ -0.35
LSS-202ENST00000397728 RUNX1Q01196 453 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 CLLU1Q5K131 121 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 DUX5Q96PT3 197 aa12.87□□□□□ -0.35
LSS-202ENST00000397728 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 J3QRE1 110 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 CD74P04233 296 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 EFNB1P98172 346 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 H1FOOQ8IZA3 346 aaPredicted RBP12.86□□□□□ -0.35
LSS-202ENST00000397728 C11orf44Q8N8P7 122 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.86□□□□□ -0.35
LSS-202ENST00000397728 MAPK1IP1LQ8NDC0 245 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 EEF1AKMT3Q96AZ1 226 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 RNASEK-C17orf49H0YIS7 233 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 ZP3P21754 424 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 C16orf92Q96LL3 132 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 PLXND1Q9Y4D7 1925 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 FCGR2BP31994 310 aaPredicted RBP12.86□□□□□ -0.35
LSS-202ENST00000397728 PPP1R27Q86WC6 154 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 PXMP4Q9Y6I8 212 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 DENND4CQ5VZ89 1909 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 ATP6V0CP27449 155 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 HSD17B13Q7Z5P4 300 aaPredicted RBP12.86□□□□□ -0.35
LSS-202ENST00000397728 COMMD1Q8N668 190 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 SLC25A33Q9BSK2 321 aa12.86□□□□□ -0.35
LSS-202ENST00000397728 ZNF430Q9H8G1 570 aaPredicted RBP12.86□□□□□ -0.35
LSS-202ENST00000397728 MELTFP08582 738 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 EBLN2Q6P2I7 272 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 OR52M1Q8NGK5 317 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 FAM103A1Q9BTL3 118 aaKnown RBP12.85□□□□□ -0.35
LSS-202ENST00000397728 TLN1Q9Y490 2541 aaKnown RBP12.85□□□□□ -0.35
LSS-202ENST00000397728 SAA2-SAA4A0A096LPE2 208 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 C1QL1O75973 258 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 FAM157CP0CG43 387 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 SAA2P0DJI9 122 aaPredicted RBP12.85□□□□□ -0.35
LSS-202ENST00000397728 TM4SF20Q53R12 229 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 FAM169BQ8N8A8 192 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 CLRN3Q8NCR9 226 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 ZNF524Q96C55 264 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 OR5AC2Q9NZP5 309 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
LSS-202ENST00000397728 ZNF250P15622 560 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 ZNF273Q14593 569 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 Q5PR19 223 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 BRD3OSQ6XYD6 125 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 NPIPB3Q92617 1050 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 OR10C1Q96KK4 312 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 MALRD1Q5VYJ5 2156 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 COL4A3Q01955 1670 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 C7orf66A4D0T2 115 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 SPINK4O60575 86 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 IGHV3-23P01764 117 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 SPSB4Q96A44 273 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 PAXXQ9BUH6 204 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 PRSS22Q9GZN4 317 aa12.85□□□□□ -0.35
LSS-202ENST00000397728 TP53BP1Q12888 1972 aaPredicted RBP12.84□□□□□ -0.35
LSS-202ENST00000397728 FAM90A26D6RGX4 464 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 SLC25A16P16260 332 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 ARPC1AQ92747 370 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 ST6GAL2Q96JF0 529 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 C11orf94C9JXX5 98 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 ORM1P02763 201 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 FABP9Q0Z7S8 132 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 CYB5R2Q6BCY4 276 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 OR4A47Q6IF82 309 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 NR2C2APQ86WQ0 139 aa12.84□□□□□ -0.35
LSS-202ENST00000397728 TXN2Q99757 166 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms