RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 PRSS3P2Q8NHM4 247 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 RNF166Q96A37 237 aaPredicted RBP7.2□□□□□ -1.26
NDE1-202ENST00000396355 PTX4Q96A99 478 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 C5orf30Q96GV9 206 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 ZGRF1Q86YA3 2104 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 MT-CO3P00414 261 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 TMEM95Q3KNT9 176 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 FAM71F2Q6NXP2 309 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 MRPL52Q86TS9 123 aaKnown RBP7.2□□□□□ -1.26
NDE1-202ENST00000396355 ARHGEF39Q8N4T4 335 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 KCNE4Q8WWG9 221 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 PIGCQ92535 297 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 KLRF1Q9NZS2 232 aa7.2□□□□□ -1.26
NDE1-202ENST00000396355 TRAV38-1A0A0B4J264 116 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 J3QKU1 62 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 PITX3O75364 302 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 KLF7O75840 302 aaPredicted RBP7.19□□□□□ -1.26
NDE1-202ENST00000396355 GPX1P07203 203 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 PHF19Q5T6S3 580 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 SPSB3Q6PJ21 355 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 TEX43Q6ZNM6 134 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 LCNL1Q6ZST4 164 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 DOLPP1Q86YN1 238 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 OR52E5Q8NH55 327 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 OR52N5Q8NH56 324 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 ZNF524Q96C55 264 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 TSPAN32Q96QS1 320 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 RAB40CQ96S21 281 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 LYRM4Q9HD34 91 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 WNK2Q9Y3S1 2297 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 RPL36A-HNRNPH2H7BZ11 118 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 NKX2-2O95096 273 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 NAPSAO96009 420 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 SUPT4H1P63272 117 aaKnown RBP7.19□□□□□ -1.26
NDE1-202ENST00000396355 CFHR1Q03591 330 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 SRSF4Q08170 494 aaKnown RBP7.19□□□□□ -1.26
NDE1-202ENST00000396355 ALKBH6Q3KRA9 238 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 TMEM97Q5BJF2 176 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 RHBDD2Q6NTF9 364 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 LINC00114Q6XXX2 140 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 SH2D6Q7Z4S9 175 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 PBOV1Q9GZY1 135 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 NHP2Q9NX24 153 aaKnown RBP7.19□□□□□ -1.26
NDE1-202ENST00000396355 INSIG2Q9Y5U4 225 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 R4GMQ9 66 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 SLC35E2P0CK97 266 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 LMO1P25800 156 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 ECI1P42126 302 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 UBE2NP61088 152 aaKnown RBP7.19□□□□□ -1.26
NDE1-202ENST00000396355 LCN2P80188 198 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 ODF1Q14990 250 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 CD300EQ496F6 205 aaPredicted RBP7.19□□□□□ -1.26
NDE1-202ENST00000396355 TBC1D26Q86UD7 250 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 OR2V1Q8NHB1 315 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 KTI12Q96EK9 354 aaPredicted RBP7.19□□□□□ -1.26
NDE1-202ENST00000396355 GPX7Q96SL4 187 aaPredicted RBP7.19□□□□□ -1.26
NDE1-202ENST00000396355 ST20Q9HBF5 79 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 GPR27Q9NS67 375 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 MRPS16Q9Y3D3 137 aaKnown RBP7.19□□□□□ -1.26
NDE1-202ENST00000396355 PCNX3Q9H6A9 2034 aa7.19□□□□□ -1.26
NDE1-202ENST00000396355 MAST4O15021 2626 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 NUP210LQ5VU65 1888 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 TMEM131Q92545 1883 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 A0A0J9YY10 115 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 LOC389332A0A1B0GUA5 103 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 GATA2P23769 480 aaPredicted RBP7.18□□□□□ -1.26
NDE1-202ENST00000396355 ATP5G3P48201 142 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 RND2P52198 227 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 HIST1H1AQ02539 215 aaPredicted RBP7.18□□□□□ -1.26
NDE1-202ENST00000396355 SSMEM1Q8WWF3 244 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 MBD3L1Q8WWY6 194 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 SSBP4Q9BWG4 385 aaPredicted RBP7.18□□□□□ -1.26
NDE1-202ENST00000396355 ANXA10Q9UJ72 324 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 CELSR3Q9NYQ7 3312 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 LOC102723996A0A087X1L8 192 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 SMIM13P0DJ93 91 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 MYF5P13349 255 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 TAS2R45P59539 299 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 LY6DQ14210 128 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 MRPL23Q16540 153 aaKnown RBP7.18□□□□□ -1.26
NDE1-202ENST00000396355 LRRC75BQ2VPJ9 315 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 TMEM249Q2WGJ8 235 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 SAMD5Q5TGI4 173 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 TMEM136Q6ZRR5 245 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 FAM222BQ8WU58 562 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 SGK494Q96LW2 274 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 MMP25Q9NPA2 562 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 PIGLQ9Y2B2 252 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 ZIC3O60481 467 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 APOMO95445 188 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 CTLA4P16410 223 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 EIF3IQ13347 325 aaKnown RBP7.18□□□□□ -1.26
NDE1-202ENST00000396355 WFDC3Q8IUB2 231 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 SPSB1Q96BD6 273 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 VSTM2LQ96N03 204 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 DCHS1Q96JQ0 3298 aa7.18□□□□□ -1.26
NDE1-202ENST00000396355 NPIPB5A8MRT5 1133 aa7.17□□□□□ -1.26
NDE1-202ENST00000396355 HLA-DRB1P01911 266 aa7.17□□□□□ -1.26
NDE1-202ENST00000396355 LINC00869P0C866 280 aa7.17□□□□□ -1.26
NDE1-202ENST00000396355 MAS1LP35410 378 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms