RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 HOGA1Q86XE5 327 aa10.82□□□□□ -0.68
NELFE-201ENST00000375425 PUSL1Q8N0Z8 303 aaKnown RBP10.82□□□□□ -0.68
NELFE-201ENST00000375425 TMEM167AQ8TBQ9 72 aa10.82□□□□□ -0.68
NELFE-201ENST00000375425 SECTM1Q8WVN6 248 aa10.82□□□□□ -0.68
NELFE-201ENST00000375425 CCL28Q9NRJ3 127 aa10.82□□□□□ -0.68
NELFE-201ENST00000375425 A0A0A6YYH2 397 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 IZUMO1RA6ND01 250 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 A6NJ64 397 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 TNFSF12O43508 249 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 RPL27AP46776 148 aaKnown RBP10.81□□□□□ -0.68
NELFE-201ENST00000375425 LCN12Q6JVE5 192 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 C19orf35Q6ZS72 473 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 SSX9Q7RTT3 188 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 Q8N402 240 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 FYTTD1Q96QD9 318 aaKnown RBP10.81□□□□□ -0.68
NELFE-201ENST00000375425 THAP7Q9BT49 309 aaPredicted RBP10.81□□□□□ -0.68
NELFE-201ENST00000375425 DIABLOQ9NR28 239 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 SLC2A9Q9NRM0 540 aa10.81□□□□□ -0.68
NELFE-201ENST00000375425 A0A1B0GW64 132 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 DPPA5A6NC42 116 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 AIREO43918 545 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 HRASP01112 189 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 PPYP01298 95 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 FCER2P06734 321 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 MAS1LP35410 378 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 MECP2P51608 486 aaKnown RBP10.8□□□□□ -0.68
NELFE-201ENST00000375425 GTSCR1Q86UQ5 136 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 ZBTB34Q8NCN2 500 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 OR13F1Q8NGS4 319 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 AUNIPQ9H7T9 357 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 ZNF257Q9Y2Q1 563 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 DMRT1Q9Y5R6 373 aa10.8□□□□□ -0.68
NELFE-201ENST00000375425 NPIPB5A8MRT5 1133 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 PPP5D1E7EU14 171 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 HLA-AP01891 365 aaKnown RBP10.79□□□□□ -0.68
NELFE-201ENST00000375425 ZNF735P0CB33 412 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 KIR2DS2P43631 304 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 RPL8P62917 257 aaKnown RBP10.79□□□□□ -0.68
NELFE-201ENST00000375425 MSMO1Q15800 293 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 ADAMTSL5Q6ZMM2 481 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 KCTD12Q96CX2 325 aaKnown RBP10.79□□□□□ -0.68
NELFE-201ENST00000375425 FANCD2OSQ96PS1 177 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 CITED4Q96RK1 184 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 SLC5A7Q9GZV3 580 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 TUBA4BQ9H853 241 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 FBXL7Q9UJT9 491 aa10.79□□□□□ -0.68
NELFE-201ENST00000375425 SULT1C2O00338 296 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 NDUFB8O95169 186 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 OR2C1O95371 312 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 CRYGCP07315 174 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 MYOD1P15172 320 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 AREGP15514 252 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 PSMB6P28072 239 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 TGFBR1P36897 503 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 FXYD4P59646 89 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 HAGHQ16775 308 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 CD300EQ496F6 205 aaPredicted RBP10.78□□□□□ -0.68
NELFE-201ENST00000375425 FAM209BQ5JX69 171 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 OR4A47Q6IF82 309 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 SPAG16Q8N0X2 631 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 OR5AP2Q8NGF4 316 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 OR2K2Q8NGT1 345 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 GIMAP1Q8WWP7 306 aa10.78□□□□□ -0.68
NELFE-201ENST00000375425 MEIS3P1A6NDR6 274 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 XRCC3O43542 346 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 TMEM127O75204 238 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 GGCTO75223 188 aaKnown RBP10.77□□□□□ -0.68
NELFE-201ENST00000375425 IGHV3-23P01764 117 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 LYL1P12980 280 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 CTRB1P17538 263 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 HLA-GP17693 338 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 CBX5P45973 191 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 KCTD21Q4G0X4 260 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 CTRB2Q6GPI1 263 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 OR4A5Q8NH83 315 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 AIFM2Q9BRQ8 373 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 HRASLSQ9HDD0 168 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 BET1LQ9NYM9 111 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 S4R3C0 116 aa10.77□□□□□ -0.68
NELFE-201ENST00000375425 RYR2Q92736 4967 aa10.77□□□□□ -0.69
NELFE-201ENST00000375425 C2orf70A6NJV1 201 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 CGB1A6NKQ9 187 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 ZNF785A8K8V0 405 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 DHFRP00374 187 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 REG1AP05451 166 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 DEFA4P12838 97 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 FOLR2P14207 255 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 RPS19P39019 145 aaKnown RBP10.76□□□□□ -0.69
NELFE-201ENST00000375425 DEFB114Q30KQ6 69 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 TIMM50Q3ZCQ8 353 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 CLEC19AQ6UXS0 136 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 ZNF818PQ6ZRF7 136 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 GPHB5Q86YW7 130 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 S100A16Q96FQ6 103 aaKnown RBP10.76□□□□□ -0.69
NELFE-201ENST00000375425 PALMDQ9NP74 551 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 TENM2Q9NT68 2774 aa10.76□□□□□ -0.69
NELFE-201ENST00000375425 TRAV3A0A0B4J244 114 aa10.75□□□□□ -0.69
NELFE-201ENST00000375425 RBFOX2O43251 390 aaKnown RBP eCLIP10.75□□□□□ -0.69
NELFE-201ENST00000375425 HPRT1P00492 218 aa10.75□□□□□ -0.69
NELFE-201ENST00000375425 NQO2P16083 231 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 853 ms