RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 OR10J1P30954 320 aa11.15□□□□□ -0.63
NCDN-201ENST00000356090 RPL31P62899 125 aaKnown RBP11.15□□□□□ -0.63
NCDN-201ENST00000356090 BCL2L2Q92843 193 aaPredicted RBP11.15□□□□□ -0.63
NCDN-201ENST00000356090 UHRF2Q96PU4 802 aa11.15□□□□□ -0.63
NCDN-201ENST00000356090 MRPL37Q9BZE1 423 aaKnown RBP11.15□□□□□ -0.63
NCDN-201ENST00000356090 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.63
NCDN-201ENST00000356090 POLR3KQ9Y2Y1 108 aaPredicted RBP11.15□□□□□ -0.63
NCDN-201ENST00000356090 PCNX1Q96RV3 2341 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 PLCE1Q9P212 2302 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 VENTXO95231 258 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 FXYD3Q14802 87 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 TDRG1Q3Y452 100 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 SPATA31B1PQ5VZV4 182 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 OR1L6Q8NGR2 347 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 LRRC29Q8WV35 223 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 TRAV3A0A0B4J244 114 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 C15orf62A8K5M9 175 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 RAB29O14966 203 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 OR7C2O60412 319 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 SERF1AO75920 110 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 HPRT1P00492 218 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 TPPP2P59282 170 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 DEFB108BQ8NET1 73 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 OR2Z1Q8NG97 314 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 FAM122AQ96E09 287 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 COQ2Q96H96 371 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 LRFN3Q9BTN0 628 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 MRPL18Q9H0U6 180 aaKnown RBP11.14□□□□□ -0.63
NCDN-201ENST00000356090 PPP1R14DQ9NXH3 145 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 NAT8BQ9UHF3 227 aa11.14□□□□□ -0.63
NCDN-201ENST00000356090 CD46P15529 392 aa11.13□□□□□ -0.63
NCDN-201ENST00000356090 LBHQ53QV2 105 aaPredicted RBP11.13□□□□□ -0.63
NCDN-201ENST00000356090 OR8I2Q8N0Y5 310 aa11.13□□□□□ -0.63
NCDN-201ENST00000356090 VAMP8Q9BV40 100 aa11.13□□□□□ -0.63
NCDN-201ENST00000356090 MBNL3Q9NUK0 354 aaKnown RBP11.13□□□□□ -0.63
NCDN-201ENST00000356090 Q6ZR03 302 aa11.13□□□□□ -0.63
NCDN-201ENST00000356090 S1PR3Q99500 378 aa11.13□□□□□ -0.63
NCDN-201ENST00000356090 HSD17B10Q99714 261 aaKnown RBP11.13□□□□□ -0.63
NCDN-201ENST00000356090 FOXF2Q12947 444 aa11.13□□□□□ -0.63
NCDN-201ENST00000356090 HLA-DRB5Q30154 266 aa11.13□□□□□ -0.63
NCDN-201ENST00000356090 ASPHD1Q5U4P2 390 aa11.13□□□□□ -0.63
NCDN-201ENST00000356090 MRPL54Q6P161 138 aaKnown RBP11.13□□□□□ -0.63
NCDN-201ENST00000356090 FAM216AQ8WUB2 273 aa11.13□□□□□ -0.63
NCDN-201ENST00000356090 KLF13Q9Y2Y9 288 aaPredicted RBP11.13□□□□□ -0.63
NCDN-201ENST00000356090 TRBV20OR9-2A0A075B6H5 130 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 NPIPB11E5RHQ5 1161 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 SP1P08047 785 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 OR10J4P0C629 311 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 FRMD6-AS1P0C7T7 363 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 LCN2P80188 198 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 ZNF146Q15072 292 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 PRR31Q5SQ13 230 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 DOLPP1Q86YN1 238 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 SIGLECL1Q8N7X8 197 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 ZBTB34Q8NCN2 500 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 MYOD1P15172 320 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 GNG10P50151 68 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 SMIM21Q3B7S5 101 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 SEPSECSQ9HD40 501 aaKnown RBP11.12□□□□□ -0.63
NCDN-201ENST00000356090 KCNIP2Q9NS61 270 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 WIPI2Q9Y4P8 454 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 MUC3AQ02505 3323 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 F2Z2F3 143 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 FOXH1O75593 365 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
NCDN-201ENST00000356090 SOX8P57073 446 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 BRWD1-AS2P59051 145 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 PSG5Q15238 335 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 ACSF3Q4G176 576 aaPredicted RBP11.12□□□□□ -0.63
NCDN-201ENST00000356090 DNLZQ5SXM8 178 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 NHLRC2Q8NBF2 726 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 OR5AU1Q8NGC0 362 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 ELOVL5Q9NYP7 299 aa11.12□□□□□ -0.63
NCDN-201ENST00000356090 YLPM1P49750 1951 aaKnown RBP11.11□□□□□ -0.63
NCDN-201ENST00000356090 HCFC1P51610 2035 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 PMS2P5A8MQ11 134 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 CGAP01215 116 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 CDKN1AP38936 164 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 TFPI2P48307 235 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 AMTP48728 403 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 RAB31Q13636 194 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 ZNRF1Q8ND25 227 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 ZCCHC14Q8WYQ9 949 aaKnown RBP11.11□□□□□ -0.63
NCDN-201ENST00000356090 C9orf172C9J069 976 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 MLNRO43193 412 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 CXorf1O96002 111 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 TIMP3P35625 211 aa11.11□□□□□ -0.63
NCDN-201ENST00000356090 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
NCDN-201ENST00000356090 MRPS18CQ9Y3D5 142 aaKnown RBP11.11□□□□□ -0.63
NCDN-201ENST00000356090 YTHDF2Q9Y5A9 579 aaKnown RBP11.11□□□□□ -0.63
NCDN-201ENST00000356090 IGHV1-2P23083 117 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 ERVK11-1P61568 191 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 FAM201AQ5SY85 155 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 DHRS13Q6UX07 377 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 ACP7Q6ZNF0 438 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 BEND2Q8NDZ0 799 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 ARRDC1-AS1Q9H2J1 176 aa11.1□□□□□ -0.63
NCDN-201ENST00000356090 INTS1Q8N201 2190 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms