RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 PPIHO43447 177 aaKnown RBP16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 CGAP01215 116 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 GCHFRP30047 84 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 PMCHL1Q16048 86 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 SLC25A34Q6PIV7 304 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 ZNF525Q8N782 197 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 GATAD1Q8WUU5 269 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 NABP2Q9BQ15 211 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 GLRX2Q9NS18 164 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 IGKV3D-11A0A0A0MRZ8 115 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 hCG_38984A0A1B0GV85 526 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 REG1AP05451 166 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 ZNF658BQ4V348 819 aaPredicted RBP16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 TMEM177Q53S58 311 aa16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 BHLHA15Q7RTS1 189 aaPredicted RBP16.07■□□□□ 0.16
NPLOC4-201ENST00000331134 GATA2P23769 480 aaPredicted RBP16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 STPG3Q8N7X2 389 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 SERF1AO75920 110 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 C10orf128Q5T292 105 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 ARTNQ5T4W7 220 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 DEFB123Q8N688 67 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 A0A087WWC5 75 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 C5orf63A6NC05 138 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 HYPMO75409 117 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 SRSF9Q13242 221 aaKnown RBP eCLIP16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 UBALD2Q8IYN6 164 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 TXNDC17Q9BRA2 123 aa16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 F11RQ9Y624 299 aaKnown RBP16.06■□□□□ 0.16
NPLOC4-201ENST00000331134 NPIPB7O75200 414 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 HSPE1P61604 102 aaKnown RBP16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 RPL39P5Q59GN2 51 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 INO80CQ6PI98 192 aaPredicted RBP16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 ZCCHC14Q8WYQ9 949 aaKnown RBP16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 EAF1Q96JC9 268 aaPredicted RBP16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 MRPL13Q9BYD1 178 aaKnown RBP16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 PLXNA1Q9UIW2 1896 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 SBF1O95248 1867 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 GBF1Q92538 1859 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 GCSHP23434 173 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 LYZL4Q96KX0 146 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 ZNF71Q9NQZ8 489 aaPredicted RBP16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 SELENOKQ9Y6D0 94 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 SPEM2Q0P670 501 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 GBGT1Q8N5D6 347 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 ZNRF1Q8ND25 227 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 FLVCR1-AS1Q8TAF5 88 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 ITLN1Q8WWA0 313 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 TMEM45BQ96B21 275 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 WDYHV1Q96HA8 205 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 A6NNC1 897 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 STXBP6Q8NFX7 210 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 DMRTA2Q96SC8 542 aa16.05■□□□□ 0.16
NPLOC4-201ENST00000331134 MYLKQ15746 1914 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 PATJQ8NI35 1801 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 LOC390937A0A1W2PQ73 354 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 TMEM210A6NLX4 147 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 C12orf77C9JDV5 145 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 ZNF841Q6ZN19 808 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 HIST3H2BBQ8N257 126 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 PRDM14Q9GZV8 571 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 RBBP6Q7Z6E9 1792 aaKnown RBP16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 C8orf88P0DMB2 117 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 PCOLCEQ15113 449 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 TMUB1Q9BVT8 246 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 PTPRDP23468 1912 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 UTRNP46939 3433 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 CELA3AP09093 270 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 MMDQ15546 238 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 C12orf54Q6X4T0 127 aa16.04■□□□□ 0.16
NPLOC4-201ENST00000331134 SLC25A17O43808 307 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 PRRX1P54821 245 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 PLP1P60201 277 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 DEFB124Q8NES8 71 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 MRPL37Q9BZE1 423 aaKnown RBP16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 AUP1Q9Y679 476 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 CEACAM1P13688 526 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 FOLR2P14207 255 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 GCSAMLQ5JQS6 135 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 KLF14Q8TD94 323 aaPredicted RBP16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 NPIPB3Q92617 1050 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 CASP8AP2Q9UKL3 1982 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 M0R296 226 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 SYNGR3O43761 229 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 NUDT3O95989 172 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 SNRNP40Q96DI7 357 aaKnown RBP16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 CHCHD2Q9Y6H1 151 aaPredicted RBP16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 AMBPP02760 352 aa16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 HOXB1P14653 301 aaPredicted RBP16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 GPR6P46095 362 aaPredicted RBP16.03■□□□□ 0.16
NPLOC4-201ENST00000331134 VENTXO95231 258 aa16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 JOSD1Q15040 202 aaPredicted RBP16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 ARL6IP6Q8N6S5 226 aa16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 FAM90A27PA6NNH2 459 aa16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 H3BVH4 76 aa16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 LCN2P80188 198 aa16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 SRSF12Q8WXF0 261 aaKnown RBP16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 PMCHL2Q9BQD1 86 aa16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 PKIBQ9C010 78 aa16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 CALYQ9NYX4 217 aa16.02■□□□□ 0.16
NPLOC4-201ENST00000331134 IGHV3-35A0A0C4DH35 117 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms