RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 LOC107984156A0A0G2JMH3 177 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 ARL17AQ8IVW1 177 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 NUP37Q8NFH4 326 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 TRGV3P03979 118 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 MPDU1O75352 247 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 APOBEC3AP31941 199 aaPredicted RBP15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 TMEM105Q8N8V8 129 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 BRWD3Q6RI45 1802 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 NPIPB11E5RHQ5 1161 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 CD24P25063 80 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 LINC00305Q7Z4B0 112 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 OR51G1Q8NGK1 321 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 ZNF729A6NN14 1252 aaPredicted RBP15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 TMEM14DPA8MWL7 114 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 IGKV1D-33P01593 117 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 IGKV1-33P01594 117 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 DLX6P56179 175 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 UNQ9370/PRO34162Q6UXP9 181 aa15.86■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A10PA6NDY2 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A18PA6NE21 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A16PA6NEW6 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A20PA6NIJ5 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A8PA6NJQ4 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A7PA6NKC0 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A22PA8MWA6 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A12PA8MX19 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A5PA8MXJ8 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A23PA8MXZ1 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 PRSS2P07478 247 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A15PP0C7V4 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A13PP0C7W8 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A14PP0C7W9 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM90A24PP0C7X0 464 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 CSRP2Q16527 193 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 A6NDN8 102 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 NPPCP23582 126 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 B9A039 149 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 IGHMP01871 453 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 LAMTOR1Q6IAA8 161 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 ACP7Q6ZNF0 438 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 FBLIM1Q8WUP2 373 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 RAX2Q96IS3 184 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 SELENOKQ9Y6D0 94 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 RAXQ9Y2V3 346 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 PSMB11A5LHX3 300 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 SPATA45Q537H7 98 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 GPR61Q9BZJ8 451 aa15.85■□□□□ 0.13
SMARCC1-201ENST00000254480 IGHV1-2P23083 117 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 SRIP30626 198 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 OR13A1Q8NGR1 328 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 A0A087WV48 116 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 C12orf77C9JDV5 145 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 TMEM186Q96B77 213 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 MTCL1Q9Y4B5 1905 aaKnown RBP15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 RPLP1P05386 114 aaKnown RBP15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 C10orf128Q5T292 105 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 PARP14Q460N5 1801 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 ADIPOQQ15848 244 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 C21orf62-AS1Q17RA5 79 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 NPDC1Q9NQX5 325 aaPredicted RBP15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 FOXA2Q9Y261 457 aaPredicted RBP15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 LYNX1G3V0Z9 82 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 LYNX1P0DP58 116 aa15.84■□□□□ 0.13
SMARCC1-201ENST00000254480 C7orf71A4D174 169 aa15.83■□□□□ 0.13
SMARCC1-201ENST00000254480 GPR82Q96P67 336 aa15.83■□□□□ 0.13
SMARCC1-201ENST00000254480 TMEM262E9PQX1 116 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 TCF21O43680 179 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 DNLZQ5SXM8 178 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 C9orf106Q8NAJ2 232 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 C17orf98A8MV24 154 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 IGHV3-11P01762 117 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 COX5BP10606 129 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 HOXB1P14653 301 aaPredicted RBP15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 ICAM4Q14773 271 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 SAXO1Q8IYX7 474 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 GATA2P23769 480 aaPredicted RBP15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 TAS2R60P59551 318 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 EEF1AKMT3Q96AZ1 226 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 MPTX1A8MV57 137 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 ERVH48-1M5A8F1 160 aa15.83■□□□□ 0.12
SMARCC1-201ENST00000254480 NPIPB6E9PJ23 425 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 PARLQ9H300 379 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 UMODP07911 640 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 TFF3Q07654 80 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 TIMM23BQ5SRD1 257 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 LY6DQ14210 128 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 TMEM45BQ96B21 275 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 AQP10Q96PS8 301 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 EMP1P54849 157 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 PSG7Q13046 419 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 DNM1P46Q6ZS02 220 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 AGAP20933 346 aa15.82■□□□□ 0.12
SMARCC1-201ENST00000254480 IGHV2OR16-5A0A0B4J2B6 119 aa15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 LEPROTL1O95214 131 aa15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 GLRXP35754 106 aa15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 PKIAP61925 76 aa15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 PSG9Q00887 426 aa15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 HEATR5BQ9P2D3 2071 aa15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 FOXA3P55318 350 aaPredicted RBP15.81■□□□□ 0.12
SMARCC1-201ENST00000254480 CCL3L1P16619 93 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms