RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TCTAP57738 103 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 SPCS3P61009 180 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 SERF2P84101 59 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 ASPHD1Q5U4P2 390 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 FAM214BQ7L5A3 538 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 FDCSPQ8NFU4 85 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 FER1L6-AS2Q96M78 137 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 TRIB1Q96RU8 372 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 DERL1Q9BUN8 251 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 CDH20Q9HBT6 801 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 OBP2BQ9NPH6 170 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 RPH3ALQ9UNE2 315 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 OTOGLQ3ZCN5 2332 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 CECR9P0C854 216 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 COX5AP20674 150 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 NPPCP23582 126 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 GABRA2P47869 451 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 ACSF3Q4G176 576 aaPredicted RBP8.41□□□□□ -1.06
COPB1-201ENST00000249923 GALMQ96C23 342 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 VAMP8Q9BV40 100 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 SNHG12Q9BXW3 62 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 NAT8Q9UHE5 227 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 TMEM30CPA0ZSE6 113 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 SLC17A3O00476 420 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 IGHG3P01860 377 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 NPSP0C0P6 89 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 GZMHP20718 246 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 IER3P46695 156 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 CNN1P51911 297 aaKnown RBP8.41□□□□□ -1.06
COPB1-201ENST00000249923 NDUFAF3Q9BU61 184 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 SLC35E4Q6ICL7 350 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 Q6ZVH6 145 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 OR10P1Q8NGE3 313 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 HEYLQ9NQ87 328 aaPredicted RBP8.4□□□□□ -1.06
COPB1-201ENST00000249923 DSCAMO60469 2012 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 FAM90A26D6RGX4 464 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 FCN1O00602 326 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 OR9G9P0C7N8 305 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 C1QTNF9P0C862 333 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 ZNF134P52741 427 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 UBE2NP61088 152 aaKnown RBP8.4□□□□□ -1.06
COPB1-201ENST00000249923 JOSD1Q15040 202 aaPredicted RBP8.4□□□□□ -1.06
COPB1-201ENST00000249923 VWC2Q2TAL6 325 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 MRGPRGQ86SM5 289 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 CNEP1R1Q8N9A8 125 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 CMTM2Q8TAZ6 248 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 TMEM242Q9NWH2 141 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 DKK4Q9UBT3 224 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 NAGKQ9UJ70 344 aa8.4□□□□□ -1.06
COPB1-201ENST00000249923 DSCAML1Q8TD84 2053 aa8.4□□□□□ -1.07
COPB1-201ENST00000249923 ANKRD11Q6UB99 2663 aaPredicted RBP8.4□□□□□ -1.07
COPB1-201ENST00000249923 TMEM210A6NLX4 147 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 C15orf62A8K5M9 175 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 A8MWP6 167 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 M0R296 226 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 SIAH2O43255 324 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 FABP6P51161 128 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 NUBP1P53384 320 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 C11orf42Q8N5U0 333 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 TMEM170AQ8WVE7 144 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 NPCDR1Q9BY65 106 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 WNT10AQ9GZT5 417 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 OOEPA6NGQ2 149 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 GCH1P30793 250 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 TDRG1Q3Y452 100 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 MRPL54Q6P161 138 aaKnown RBP8.39□□□□□ -1.07
COPB1-201ENST00000249923 SEM1Q6ZVN7 128 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 VKORC1L1Q8N0U8 176 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 RAB24Q969Q5 203 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 C1orf159Q96HA4 380 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 QTRT1Q9BXR0 403 aaKnown RBP8.39□□□□□ -1.07
COPB1-201ENST00000249923 IGKV1D-17A0A075B6S4 117 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 IGHV1-18A0A0C4DH31 117 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 A0A1B0GWJ7 208 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 MARCH11A6NNE9 402 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 F6UZH7 168 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 TNFSF13O75888 250 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 ATP5G3P48201 142 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 AMTP48728 403 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 NUTF2P61970 127 aaKnown RBP8.39□□□□□ -1.07
COPB1-201ENST00000249923 RPL23P62829 140 aaKnown RBP8.39□□□□□ -1.07
COPB1-201ENST00000249923 PNRC1Q12796 327 aaPredicted RBP8.39□□□□□ -1.07
COPB1-201ENST00000249923 PRR27Q6MZM9 219 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 INO80CQ6PI98 192 aaPredicted RBP8.39□□□□□ -1.07
COPB1-201ENST00000249923 FAM90A1Q86YD7 464 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 PRR7Q8TB68 274 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 P2RX4Q99571 388 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 MRPL37Q9BZE1 423 aaKnown RBP8.39□□□□□ -1.07
COPB1-201ENST00000249923 PSG11Q9UQ72 335 aa8.39□□□□□ -1.07
COPB1-201ENST00000249923 APC2O95996 2303 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 PFN1P07737 140 aaKnown RBP8.38□□□□□ -1.07
COPB1-201ENST00000249923 HINT1P49773 126 aaPredicted RBP8.38□□□□□ -1.07
COPB1-201ENST00000249923 MANBALQ9NQG1 85 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 NAT8BQ9UHF3 227 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 TIMM9Q9Y5J7 89 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 TRAV3A0A0B4J244 114 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 B4DEV8 164 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 CLDN14O95500 239 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 HPRT1P00492 218 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 IGLV1-44P01699 117 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms