RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 BRI3O95415 125 aa16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 ELK1P19419 428 aa16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 HLA-DMAP28067 261 aa16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 RPL27AP46776 148 aaKnown RBP16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 RHOGP84095 191 aa16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 ANKRD13BQ86YJ7 626 aa16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 USMG5Q96IX5 58 aa16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 OR4C12Q96R67 309 aa16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 RSRP1Q9BUV0 290 aa16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 MRPS26Q9BYN8 205 aaKnown RBP16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 HRASLSQ9HDD0 168 aa16.24■□□□□ 0.19
HCFC1R1-201ENST00000248089 DPPA5A6NC42 116 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 FAM25AB3EWG3 89 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 FAM25CB3EWG5 89 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 FAM25GB3EWG6 89 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 TRBV12-3P01733 135 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 NAT1P18440 290 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 HRH1P35367 487 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 ZNF45Q02386 682 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 EXOSC2Q13868 293 aaKnown RBP16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 CTF1Q16619 201 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 C11orf87Q6NUJ2 197 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 ZNF343Q6P1L6 599 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 GPX8Q8TED1 209 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 BORCS5Q969J3 196 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 MOB3AQ96BX8 217 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 CMTM3Q96MX0 182 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 ELOVL1Q9BW60 279 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 FXYD6Q9H0Q3 95 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 AKIP1Q9NQ31 210 aa16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 PEF1Q9UBV8 284 aaKnown RBP16.23■□□□□ 0.19
HCFC1R1-201ENST00000248089 FAM223BA6NKX1 122 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 TEX22C9J3V5 150 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 RBFOX2O43251 390 aaKnown RBP eCLIP16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 RLN1P04808 185 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 SPNP16150 400 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 GNRHRP30968 328 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 MAS1LP35410 378 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 RPL8P62917 257 aaKnown RBP16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 RNASE12Q5GAN4 147 aaKnown RBP16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 OR4A47Q6IF82 309 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 MZT2AQ6P582 158 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 DHRS11Q6UWP2 260 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 HAPLN4Q86UW8 402 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 SLC25A42Q86VD7 318 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 FAM223AQ8IWN6 122 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 TTC9CQ8N5M4 171 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 OR6Q1Q8NGQ2 317 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 AP3S1Q92572 193 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 AIFM2Q9BRQ8 373 aa16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 LSM4Q9Y4Z0 139 aaKnown RBP16.22■□□□□ 0.19
HCFC1R1-201ENST00000248089 S1PR2O95136 353 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 HPRT1P00492 218 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 IL6RP08887 468 aaPredicted RBP16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 MYOD1P15172 320 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 TAS2R31P59538 309 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 ATP5G2Q06055 141 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 C19orf35Q6ZS72 473 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 GPR141Q7Z602 305 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 DMBX1Q8NFW5 382 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 OR6F1Q8NGZ6 308 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 SCPEP1Q9HB40 452 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 BET1LQ9NYM9 111 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 ZNF257Q9Y2Q1 563 aa16.21■□□□□ 0.19
HCFC1R1-201ENST00000248089 DNAH9Q9NYC9 4486 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 E7EUB6 86 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 OR2J3O76001 311 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 RPA2P15927 270 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 NQO2P16083 231 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 HLA-GP17693 338 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 RCVRNP35243 200 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 SYNJ2BPP57105 145 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 RPEL1Q2QD12 228 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 LYSMD2Q8IV50 215 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 OR4A5Q8NH83 315 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 CD300LFQ8TDQ1 290 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 ADAM30Q9UKF2 790 aa16.2■□□□□ 0.18
HCFC1R1-201ENST00000248089 TRBV9A0A0B4J1U6 114 aa16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 A0A1B0GW64 132 aa16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 ZNF735P0CB33 412 aa16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 AREGP15514 252 aa16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 ZNF182P17025 639 aaPredicted RBP16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 TSPAN5P62079 268 aa16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 CMTM1Q8IZ96 169 aa16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 NECAP1Q8NC96 275 aa16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 PLEKHA2Q9HB19 425 aa16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 TMEM140Q9NV12 185 aa16.19■□□□□ 0.18
HCFC1R1-201ENST00000248089 NPIPB5A8MRT5 1133 aa16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 PGLYRP1O75594 196 aaPredicted RBP16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 REG1AP05451 166 aa16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 GP9P14770 177 aa16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 ERVK-16P61578 105 aa16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 KLF5Q13887 457 aaPredicted RBP16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 C15orf32Q32M92 178 aa16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 OR9G4Q8NGQ1 327 aa16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 SLC2A9Q9NRM0 540 aa16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 COMMD9Q9P000 198 aa16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 EXTL2Q9UBQ6 330 aa16.18■□□□□ 0.18
HCFC1R1-201ENST00000248089 TRAV3A0A0B4J244 114 aa16.17■□□□□ 0.18
HCFC1R1-201ENST00000248089 GPR31O00270 319 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms