RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 DRAXINQ8NBI3 349 aaPredicted RBP11.95□□□□□ -0.5
RAB40B-203ENST00000570676 GPHA2Q96T91 129 aa11.95□□□□□ -0.5
RAB40B-203ENST00000570676 IGHV1-3A0A0C4DH29 117 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 FGF16O43320 207 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 PGLYRP1O75594 196 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-203ENST00000570676 PRB2P02812 416 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-203ENST00000570676 GAPDHP04406 335 aaKnown RBP11.94□□□□□ -0.5
RAB40B-203ENST00000570676 AKR1C4P17516 323 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 ANXA7P20073 488 aaKnown RBP11.94□□□□□ -0.5
RAB40B-203ENST00000570676 RAB25P57735 213 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 TAS2R31P59538 309 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 RND3P61587 244 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 EBI3Q14213 229 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 HES1Q14469 280 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 OXA1LQ15070 435 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 CENPVQ7Z7K6 275 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-203ENST00000570676 TBC1D26Q86UD7 250 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 OR4X2Q8NGF9 303 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 CHPT1Q8WUD6 406 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 RTN4IP1Q8WWV3 396 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-203ENST00000570676 HSD17B10Q99714 261 aaKnown RBP11.94□□□□□ -0.5
RAB40B-203ENST00000570676 MRPL20Q9BYC9 149 aaKnown RBP11.94□□□□□ -0.5
RAB40B-203ENST00000570676 TSSC4Q9Y5U2 329 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-203ENST00000570676 TGP01266 2768 aa11.94□□□□□ -0.5
RAB40B-203ENST00000570676 TEX13DA0A0J9YY54 714 aaPredicted RBP11.93□□□□□ -0.5
RAB40B-203ENST00000570676 INMT-MINDY4F8WBC2 141 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 MPPED1O15442 326 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 TXNL1O43396 289 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 DUTP33316 252 aaKnown RBP11.93□□□□□ -0.5
RAB40B-203ENST00000570676 THBS3P49746 956 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 LINC00205P59089 165 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 EIF4EBP1Q13541 118 aaPredicted RBP11.93□□□□□ -0.5
RAB40B-203ENST00000570676 ZNF66Q6ZN08 573 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 SLC25A42Q86VD7 318 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 Q8N6K4 173 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 MINDY2Q8NBR6 621 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 OR51H1Q8NH63 302 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 TCTEX1D2Q8WW35 142 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 TMEM230Q96A57 120 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 MARVELD1Q9BSK0 173 aa11.93□□□□□ -0.5
RAB40B-203ENST00000570676 NOTCH3Q9UM47 2321 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 DNAH3Q8TD57 4116 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 IGHV3-72A0A0B4J1Y9 119 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 TCRBV4S1A1TA0A5B7 111 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 CRYM-AS1A6NIL9 109 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 CT45A6P0DMU7 189 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 CT45A5P0DMU8 189 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 CT45A7P0DMV0 189 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 PF4V1P10720 104 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 RPL30P62888 115 aaKnown RBP11.92□□□□□ -0.5
RAB40B-203ENST00000570676 CATR1Q13166 79 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 HNF4GQ14541 408 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 TMEM128Q5BJH2 165 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 GLDNQ6ZMI3 551 aaPredicted RBP11.92□□□□□ -0.5
RAB40B-203ENST00000570676 KCTD9Q7L273 389 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 MOB3BQ86TA1 216 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 SGPP2Q8IWX5 399 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 WFDC9Q8NEX5 89 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 ADTRPQ96IZ2 230 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 EAF1Q96JC9 268 aaPredicted RBP11.92□□□□□ -0.5
RAB40B-203ENST00000570676 NABP2Q9BQ15 211 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 NAA60Q9H7X0 242 aa11.92□□□□□ -0.5
RAB40B-203ENST00000570676 PSMB11A5LHX3 300 aa11.91□□□□□ -0.5
RAB40B-203ENST00000570676 LINC00473A8K010 186 aa11.91□□□□□ -0.5
RAB40B-203ENST00000570676 IGHG2P01859 326 aa11.91□□□□□ -0.5
RAB40B-203ENST00000570676 F2RP25116 425 aa11.91□□□□□ -0.5
RAB40B-203ENST00000570676 MECP2P51608 486 aaKnown RBP11.91□□□□□ -0.5
RAB40B-203ENST00000570676 UBE2MP61081 183 aaKnown RBP11.91□□□□□ -0.5
RAB40B-203ENST00000570676 C4orf46Q504U0 113 aa11.91□□□□□ -0.5
RAB40B-203ENST00000570676 OR2B11Q5JQS5 317 aa11.91□□□□□ -0.5
RAB40B-203ENST00000570676 ZNF383Q8NA42 475 aa11.91□□□□□ -0.5
RAB40B-203ENST00000570676 NOL4LQ96MY1 436 aaPredicted RBP11.91□□□□□ -0.5
RAB40B-203ENST00000570676 ALX4Q9H161 411 aaPredicted RBP11.91□□□□□ -0.5
RAB40B-203ENST00000570676 LIN7CQ9NUP9 197 aaKnown RBP11.91□□□□□ -0.5
RAB40B-203ENST00000570676 PRELID3BQ9Y3B1 194 aa11.91□□□□□ -0.5
RAB40B-203ENST00000570676 C3orf85A0A1B0GTC6 90 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 DHFRP00374 187 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 OR4E1P0C645 316 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 CD33P20138 364 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 VAMP1P23763 118 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 DHODHQ02127 395 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 PPP1R1AQ13522 171 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 KHDC1LQ5JSQ8 128 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 ETV3LQ6ZN32 361 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 REC114Q7Z4M0 266 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 ZNF329Q86UD4 541 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 DDB2Q92466 427 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 AURKAIP1Q9NWT8 199 aaPredicted RBP11.9□□□□□ -0.5
RAB40B-203ENST00000570676 KCNIP3Q9Y2W7 256 aa11.9□□□□□ -0.5
RAB40B-203ENST00000570676 H0Y980 276 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 H0YJW9 148 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 H7C2Y5 167 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 FCGR3BO75015 233 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 APOA2P02652 100 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 PF4P02776 101 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 IGLL1P15814 213 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 KIR2DS2P43631 304 aa11.89□□□□□ -0.51
RAB40B-203ENST00000570676 SUPT4H1P63272 117 aaKnown RBP11.89□□□□□ -0.51
RAB40B-203ENST00000570676 TAGLNQ01995 201 aaKnown RBP11.89□□□□□ -0.51
RAB40B-203ENST00000570676 SP6Q3SY56 376 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms