RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 M0R381 172 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 SDCBPO00560 298 aaPredicted RBP-0.55□□□□□ -2.5
CASC4-211ENST00000561305 OR2T1O43869 369 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 SNAP29O95721 258 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 HBZP02008 142 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 UBBP0CG47 229 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 DAD1P61803 113 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 FKBP1AP62942 108 aaKnown RBP-0.55□□□□□ -2.5
CASC4-211ENST00000561305 TMEM267Q0VDI3 215 aaPredicted RBP-0.55□□□□□ -2.5
CASC4-211ENST00000561305 AHSA2Q719I0 299 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 LCA10Q71F78 164 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 GRINAQ7Z429 371 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 MS4A6EQ96DS6 147 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 EMC3Q9P0I2 261 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 SNRNP200O75643 2136 aaKnown RBP-0.55□□□□□ -2.5
CASC4-211ENST00000561305 KIF24Q5T7B8 1368 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 IRGMA1A4Y4 181 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 OR6C6A6NF89 314 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 C9JCJ5 164 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 ARL6IP5O75915 188 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 CCL5P13501 91 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 UBE2KP61086 200 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 AKR1C1Q04828 323 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 XKRXQ6PP77 449 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 CIDECQ96AQ7 238 aaPredicted RBP-0.56□□□□□ -2.5
CASC4-211ENST00000561305 YIPF3Q9GZM5 350 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 NIT2Q9NQR4 276 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 HEATR5AQ86XA9 2040 aa-0.56□□□□□ -2.5
CASC4-211ENST00000561305 DSTQ03001 7570 aaKnown RBP-0.56□□□□□ -2.5
CASC4-211ENST00000561305 COPEO14579 308 aa-0.57□□□□□ -2.5
CASC4-211ENST00000561305 SHBGP04278 402 aa-0.57□□□□□ -2.5
CASC4-211ENST00000561305 FLOT2Q14254 428 aa-0.57□□□□□ -2.5
CASC4-211ENST00000561305 EXOC3L4Q17RC7 722 aa-0.57□□□□□ -2.5
CASC4-211ENST00000561305 LCN8Q6JVE9 175 aa-0.57□□□□□ -2.5
CASC4-211ENST00000561305 RPRD1BQ9NQG5 326 aaKnown RBP-0.57□□□□□ -2.5
CASC4-211ENST00000561305 NAT8Q9UHE5 227 aa-0.57□□□□□ -2.5
CASC4-211ENST00000561305 KIAA0232Q92628 1395 aa-0.57□□□□□ -2.5
CASC4-211ENST00000561305 PEAK1Q9H792 1746 aa-0.58□□□□□ -2.5
CASC4-211ENST00000561305 CALRP27797 417 aaKnown RBP-0.58□□□□□ -2.5
CASC4-211ENST00000561305 ADORA1P30542 326 aa-0.58□□□□□ -2.5
CASC4-211ENST00000561305 LRRC6Q86X45 466 aa-0.58□□□□□ -2.5
CASC4-211ENST00000561305 MITD1Q8WV92 249 aa-0.58□□□□□ -2.5
CASC4-211ENST00000561305 TLCD1Q96CP7 247 aa-0.58□□□□□ -2.5
CASC4-211ENST00000561305 HINT2Q9BX68 163 aa-0.58□□□□□ -2.5
CASC4-211ENST00000561305 NCOR1P1Q9H4R4 102 aa-0.58□□□□□ -2.5
CASC4-211ENST00000561305 ALPK3Q96L96 1907 aa-0.58□□□□□ -2.5
CASC4-211ENST00000561305 ANAPC1Q9H1A4 1944 aa-0.58□□□□□ -2.5
CASC4-211ENST00000561305 NSD1Q96L73 2696 aaPredicted RBP-0.59□□□□□ -2.5
CASC4-211ENST00000561305 TRAV8-1A0A0A6YYK1 113 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 ASS1P00966 412 aaKnown RBP-0.59□□□□□ -2.5
CASC4-211ENST00000561305 TFPTP0C1Z6 253 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 TMEM33P57088 247 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 RAB31Q13636 194 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 ZNF345Q14585 488 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 ZNF846Q147U1 533 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 C18orf21Q32NC0 220 aaPredicted RBP-0.59□□□□□ -2.5
CASC4-211ENST00000561305 GPHB5Q86YW7 130 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 Q8N814 137 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 Q8WTZ3 238 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 FAM210AQ96ND0 272 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 NABP2Q9BQ15 211 aa-0.59□□□□□ -2.5
CASC4-211ENST00000561305 ASH1LQ9NR48 2969 aaKnown RBP-0.59□□□□□ -2.5
CASC4-211ENST00000561305 ADGRB2O60241 1585 aa-0.6□□□□□ -2.51
CASC4-211ENST00000561305 TRBV10-2A0A0K0K1G8 114 aa-0.6□□□□□ -2.51
CASC4-211ENST00000561305 MSMBP08118 114 aa-0.6□□□□□ -2.51
CASC4-211ENST00000561305 NQO2P16083 231 aa-0.6□□□□□ -2.51
CASC4-211ENST00000561305 ZNF93P35789 620 aaPredicted RBP-0.6□□□□□ -2.51
CASC4-211ENST00000561305 PSMD7P51665 324 aa-0.6□□□□□ -2.51
CASC4-211ENST00000561305 UBE2IP63279 158 aaKnown RBP-0.6□□□□□ -2.51
CASC4-211ENST00000561305 NDUFA5Q16718 116 aa-0.6□□□□□ -2.51
CASC4-211ENST00000561305 TMEM249Q2WGJ8 235 aa-0.6□□□□□ -2.51
CASC4-211ENST00000561305 GDF5OSQ5U4N7 250 aa-0.6□□□□□ -2.51
CASC4-211ENST00000561305 BZW2Q9Y6E2 419 aaKnown RBP-0.6□□□□□ -2.51
CASC4-211ENST00000561305 EML6Q6ZMW3 1958 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 A0A1B0GW15 77 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 F5H5K5 113 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 GOLGA8RI6L899 631 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 M0R2N4 97 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 LIMS3P0CW19 117 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 LIMS4P0CW20 117 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 PTNP21246 168 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 MSNP26038 577 aaKnown RBP-0.61□□□□□ -2.51
CASC4-211ENST00000561305 ZNF418Q8TF45 676 aaPredicted RBP-0.61□□□□□ -2.51
CASC4-211ENST00000561305 TMEM239Q8WW34 195 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 ACOT12Q8WYK0 555 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 C12orf43Q96C57 262 aaKnown RBP-0.61□□□□□ -2.51
CASC4-211ENST00000561305 TMEM56Q96MV1 263 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 BAIAP2Q9UQB8 552 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 NCOR2Q9Y618 2525 aa-0.61□□□□□ -2.51
CASC4-211ENST00000561305 ZNF106Q9H2Y7 1883 aaKnown RBP-0.61□□□□□ -2.51
CASC4-211ENST00000561305 NUP153P49790 1475 aaKnown RBP-0.61□□□□□ -2.51
CASC4-211ENST00000561305 BDP1A6H8Y1 2624 aa-0.62□□□□□ -2.51
CASC4-211ENST00000561305 MUC12Q9UKN1 5478 aa-0.62□□□□□ -2.51
CASC4-211ENST00000561305 A0A0D9SG42 100 aa-0.62□□□□□ -2.51
CASC4-211ENST00000561305 A0A1B0GW54 56 aa-0.62□□□□□ -2.51
CASC4-211ENST00000561305 LIN7AO14910 233 aaPredicted RBP-0.62□□□□□ -2.51
CASC4-211ENST00000561305 SGCEO43556 437 aa-0.62□□□□□ -2.51
CASC4-211ENST00000561305 PMP2P02689 132 aa-0.62□□□□□ -2.51
CASC4-211ENST00000561305 H2BFSP57053 126 aa-0.62□□□□□ -2.51
CASC4-211ENST00000561305 TSKUQ8WUA8 353 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms