RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SFXN4Q6P4A7 337 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 SGPP2Q8IWX5 399 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 MMD2Q8IY49 270 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 MUC7Q8TAX7 377 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 LGALS14Q8TCE9 139 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 DCUN1D5Q9BTE7 237 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 Q9H521 79 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 ZNF430Q9H8G1 570 aaPredicted RBP10.83□□□□□ -0.68
SNX6-210ENST00000557341 SSR3Q9UNL2 185 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 H0Y980 276 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 TUSC2O75896 110 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 OR2A4O95047 310 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 ATP6V1G2O95670 118 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 TRBV12-3P01733 135 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 HLA-DQB1P01920 261 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 OR2B11Q5JQS5 317 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 CNIH2Q6PI25 160 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 FAM223AQ8IWN6 122 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 SNAPC3Q92966 411 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 SPIN2AQ99865 258 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 SPIN2BQ9BPZ2 258 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 ANXA10Q9UJ72 324 aa10.82□□□□□ -0.68
SNX6-210ENST00000557341 RBMX2Q9Y388 322 aaKnown RBP10.82□□□□□ -0.68
SNX6-210ENST00000557341 RRP15Q9Y3B9 282 aaKnown RBP10.82□□□□□ -0.68
SNX6-210ENST00000557341 A8MZ25 164 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 SCAND1P57086 179 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 RHOGP84095 191 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 EXOSC2Q13868 293 aaKnown RBP10.81□□□□□ -0.68
SNX6-210ENST00000557341 LCN12Q6JVE5 192 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 Q8N1Y9 231 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 OR4S2Q8NH73 311 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 VSTM2AQ8TAG5 236 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 HSD17B10Q99714 261 aaKnown RBP10.81□□□□□ -0.68
SNX6-210ENST00000557341 TM2D3Q9BRN9 247 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 AKIP1Q9NQ31 210 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 RHBDL2Q9NX52 303 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 SIGLEC8Q9NYZ4 499 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 PEMTQ9UBM1 199 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 ADAM30Q9UKF2 790 aa10.81□□□□□ -0.68
SNX6-210ENST00000557341 IGKV1D-13A0A0B4J2D9 117 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 SSX5O60225 188 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 RBMXL2O75526 392 aaKnown RBP10.8□□□□□ -0.68
SNX6-210ENST00000557341 IGLV2-14P01704 120 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 PRH1P02810 166 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 IGKV1-13P0DP09 117 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 RPL30P62888 115 aaKnown RBP10.8□□□□□ -0.68
SNX6-210ENST00000557341 C10orf55Q5SWW7 151 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 IL34Q6ZMJ4 242 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 GTSCR1Q86UQ5 136 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 SLC25A42Q86VD7 318 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 TCTEX1D2Q8WW35 142 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 YTHDF1Q9BYJ9 559 aaKnown RBP10.8□□□□□ -0.68
SNX6-210ENST00000557341 SPATA2Q9UM82 520 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 ETV7Q9Y603 341 aa10.8□□□□□ -0.68
SNX6-210ENST00000557341 TRBV9A0A0B4J1U6 114 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 KBTBD11O94819 623 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 SDC2P34741 201 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 ARPC4P59998 168 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 ZNF45Q02386 682 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 MXD1Q05195 221 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 FAM209BQ5JX69 171 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 CASC10Q5T4H9 136 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 ZNF773Q6PK81 442 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 VKORC1L1Q8N0U8 176 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 Q8N402 240 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 TTC9CQ8N5M4 171 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 NECAP1Q8NC96 275 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 OR51E2Q9H255 320 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 C19orf73Q9NVV2 129 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 TAS2R8Q9NYW2 309 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 ZNF257Q9Y2Q1 563 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 CSMD3Q7Z407 3707 aa10.79□□□□□ -0.68
SNX6-210ENST00000557341 BMPR1BO00238 502 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 AIREO43918 545 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 CSN3P07498 182 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 ATP5G2Q06055 141 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 EIF4EBP1Q13541 118 aaPredicted RBP10.78□□□□□ -0.68
SNX6-210ENST00000557341 C15orf32Q32M92 178 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 ZNF66Q6ZN08 573 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 BEST4Q8NFU0 473 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 SLC25A38Q96DW6 304 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 OR2A7Q96R45 310 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 CITED4Q96RK1 184 aa10.78□□□□□ -0.68
SNX6-210ENST00000557341 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.77□□□□□ -0.69
SNX6-210ENST00000557341 A0A0A6YYH2 397 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 LOC100506127A0A0U1RQW1 187 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 DPPA5A6NC42 116 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 A6NJ64 397 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 TEX22C9J3V5 150 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 OR2J3O76001 311 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 MAS1LP35410 378 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 KIR2DS2P43631 304 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 RPL27AP46776 148 aaKnown RBP10.77□□□□□ -0.69
SNX6-210ENST00000557341 IDNKQ5T6J7 187 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 PUSL1Q8N0Z8 303 aaKnown RBP10.77□□□□□ -0.69
SNX6-210ENST00000557341 MFSD4AQ8N468 514 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 OR13F1Q8NGS4 319 aa10.77□□□□□ -0.69
SNX6-210ENST00000557341 OR2K2Q8NGT1 345 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms