RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ACOT12Q8WYK0 555 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 MCRIP2Q9BUT9 160 aaKnown RBP15.89■□□□□ 0.13
VTI1B-205ENST00000555543 TNCP24821 2201 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 NAT1P18440 290 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 PRSS3P35030 304 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 TPPP2P59282 170 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 MSMO1Q15800 293 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 ZNF66Q6ZN08 573 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 VKORC1L1Q8N0U8 176 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 OR5T1Q8NG75 326 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 OR1N2Q8NGR9 330 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 MRAPQ8TCY5 172 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 GIMAP1Q8WWP7 306 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 CMTM3Q96MX0 182 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 DCUN1D5Q9BTE7 237 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 SLC5A7Q9GZV3 580 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 ZNF430Q9H8G1 570 aaPredicted RBP15.88■□□□□ 0.13
VTI1B-205ENST00000555543 EHFQ9NZC4 300 aa15.88■□□□□ 0.13
VTI1B-205ENST00000555543 MRPS7Q9Y2R9 242 aaKnown RBP15.88■□□□□ 0.13
VTI1B-205ENST00000555543 IGHV3-11P01762 117 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 APELAP0DMC3 54 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 RFX2P48378 723 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 ZNF616Q08AN1 781 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 TNXAQ16473 311 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 TMEM17Q86X19 198 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 POC5Q8NA72 575 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 OR4S2Q8NH73 311 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 GPX8Q8TED1 209 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 GPR61Q9BZJ8 451 aa15.87■□□□□ 0.13
VTI1B-205ENST00000555543 PMP2P02689 132 aa15.86■□□□□ 0.13
VTI1B-205ENST00000555543 TRGV3P03979 118 aa15.86■□□□□ 0.13
VTI1B-205ENST00000555543 LGALS1P09382 135 aaKnown RBP15.86■□□□□ 0.13
VTI1B-205ENST00000555543 C10orf55Q5SWW7 151 aa15.86■□□□□ 0.13
VTI1B-205ENST00000555543 ZNF818PQ6ZRF7 136 aa15.86■□□□□ 0.13
VTI1B-205ENST00000555543 SNX29P2Q8IUI4 249 aa15.86■□□□□ 0.13
VTI1B-205ENST00000555543 SLA2Q9H6Q3 261 aa15.86■□□□□ 0.13
VTI1B-205ENST00000555543 WI2-2373I1.2A0A1W2PRP0 233 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 K7EIL1 84 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 RAMP3O60896 148 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 OR8U8P0C7N1 319 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 DEFA5Q01523 94 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 DYRK1AQ13627 763 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 LYSMD2Q8IV50 215 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 OR5H2Q8NGV7 314 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 SRSF12Q8WXF0 261 aaKnown RBP15.85■□□□□ 0.13
VTI1B-205ENST00000555543 DPF1Q92782 380 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 ZNF2Q9BSG1 426 aaPredicted RBP15.85■□□□□ 0.13
VTI1B-205ENST00000555543 RBM38Q9H0Z9 239 aaKnown RBP15.85■□□□□ 0.13
VTI1B-205ENST00000555543 ZNF355PQ9NSJ1 428 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 CEPT1Q9Y6K0 416 aa15.85■□□□□ 0.13
VTI1B-205ENST00000555543 IGHV4OR15-8A0A075B7B6 117 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 A0A087WW49 117 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 MSGN1A6NI15 193 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 ZNF182P17025 639 aaPredicted RBP15.84■□□□□ 0.13
VTI1B-205ENST00000555543 HRH1P35367 487 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 SLURP1P55000 103 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 TAS2R46P59540 309 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 HERV-K104P61576 105 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 SPCS2Q15005 226 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 DHRS11Q6UWP2 260 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 ZBTB34Q8NCN2 500 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 RHOVQ96L33 236 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 PHB2Q99623 299 aa15.84■□□□□ 0.13
VTI1B-205ENST00000555543 FAM25AB3EWG3 89 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 FAM25CB3EWG5 89 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 FAM25GB3EWG6 89 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 SEC14L6B5MCN3 397 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 H3BUA1 57 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 SULT1C2O00338 296 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 KBTBD11O94819 623 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 HLA-DMAP28067 261 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 CD40LGP29965 261 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 GNRHRP30968 328 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 MZT2AQ6P582 158 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 MMD2Q8IY49 270 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 SPAG16Q8N0X2 631 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 PUSL1Q8N0Z8 303 aaKnown RBP15.83■□□□□ 0.12
VTI1B-205ENST00000555543 DCUN1D4Q92564 292 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 AP3S1Q92572 193 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 MOB3AQ96BX8 217 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 DGCR14Q96DF8 476 aaKnown RBP15.83■□□□□ 0.12
VTI1B-205ENST00000555543 TMEM68Q96MH6 324 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 FXYD6Q9H0Q3 95 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 SCPEP1Q9HB40 452 aa15.83■□□□□ 0.12
VTI1B-205ENST00000555543 LINC01619G3V211 115 aa15.82■□□□□ 0.12
VTI1B-205ENST00000555543 RBMXL2O75526 392 aaKnown RBP15.82■□□□□ 0.12
VTI1B-205ENST00000555543 KIR2DS2P43631 304 aa15.82■□□□□ 0.12
VTI1B-205ENST00000555543 C9orf66Q5T8R8 295 aa15.82■□□□□ 0.12
VTI1B-205ENST00000555543 SSX9Q7RTT3 188 aa15.82■□□□□ 0.12
VTI1B-205ENST00000555543 CLVS1Q8IUQ0 354 aaPredicted RBP15.82■□□□□ 0.12
VTI1B-205ENST00000555543 ADAD2Q8NCV1 583 aaKnown RBP15.82■□□□□ 0.12
VTI1B-205ENST00000555543 OR51H1Q8NH63 302 aa15.82■□□□□ 0.12
VTI1B-205ENST00000555543 TMEM167AQ8TBQ9 72 aa15.82■□□□□ 0.12
VTI1B-205ENST00000555543 DLX4Q92988 240 aaPredicted RBP15.82■□□□□ 0.12
VTI1B-205ENST00000555543 TINAGL1Q9GZM7 467 aaPredicted RBP15.82■□□□□ 0.12
VTI1B-205ENST00000555543 COA4Q9NYJ1 87 aa15.82■□□□□ 0.12
VTI1B-205ENST00000555543 ADAM30Q9UKF2 790 aa15.82■□□□□ 0.12
VTI1B-205ENST00000555543 CREBL2O60519 120 aaPredicted RBP15.81■□□□□ 0.12
VTI1B-205ENST00000555543 OR2A4O95047 310 aa15.81■□□□□ 0.12
VTI1B-205ENST00000555543 RNASE12Q5GAN4 147 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms