RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MIC13Q5XKP0 118 aa11.62□□□□□ -0.55
SCNN1A-215ENST00000540037 GALMQ96C23 342 aa11.62□□□□□ -0.55
SCNN1A-215ENST00000540037 DCTN5Q9BTE1 182 aa11.62□□□□□ -0.55
SCNN1A-215ENST00000540037 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
SCNN1A-215ENST00000540037 K7EN84 100 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 DLEU1O43261 78 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 RAC2P15153 192 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 ARR3P36575 388 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 FAM103A1Q9BTL3 118 aaKnown RBP11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 YTHDF2Q9Y5A9 579 aaKnown RBP11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 MARCH11A6NNE9 402 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 RPLP1P05386 114 aaKnown RBP11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 SERPINA7P05543 415 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 TIMP3P35625 211 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 TNFSF10P50591 281 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 KRTCAP3Q53RY4 240 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 SSMEM1Q8WWF3 244 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 ZNF703Q9H7S9 590 aaPredicted RBP11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 GOLT1BQ9Y3E0 138 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 HCFC1P51610 2035 aa11.61□□□□□ -0.55
SCNN1A-215ENST00000540037 C17orf112F2Z3M2 114 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 SH2D1BO14796 132 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 HAND1O96004 215 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 ZNF90Q03938 601 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 TRIP6Q15654 476 aaKnown RBP11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 SPATA31B1PQ5VZV4 182 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 CLDN14O95500 239 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 OR5I1Q13606 314 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 TIPARPQ7Z3E1 657 aaKnown RBP11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 OR2M7Q8NG81 312 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 R3HDM4Q96D70 268 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 RTL8AQ9BWD3 113 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 MRPL18Q9H0U6 180 aaKnown RBP11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 KCNIP2Q9NS61 270 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 WDR83OSQ9Y284 106 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 MED13Q9UHV7 2174 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 CD99P14209 185 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 IER3P46695 156 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 GABRA2P47869 451 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 KCNIP1Q9NZI2 227 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 PSG11Q9UQ72 335 aa11.6□□□□□ -0.55
SCNN1A-215ENST00000540037 TET2Q6N021 2002 aaPredicted RBP11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 FOXH1O75593 365 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 CRISP2P16562 243 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 BRS3P32247 399 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 COMPP49747 757 aaPredicted RBP11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 SLC35B1P78383 322 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 ZNF146Q15072 292 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 ARSJQ5FYB0 599 aaPredicted RBP11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 OR10G8Q8NGN5 311 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 COQ2Q96H96 371 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 LPAR2Q9HBW0 351 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 LOXL2Q9Y4K0 774 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 IGHEP01854 428 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 ASPHD1Q5U4P2 390 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 TEX43Q6ZNM6 134 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 ABHD12Q8N2K0 398 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 MGST2Q99735 147 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 MIEN1Q9BRT3 115 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 MS4A5Q9H3V2 200 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 DCHS1Q96JQ0 3298 aa11.59□□□□□ -0.55
SCNN1A-215ENST00000540037 TRAV3A0A0B4J244 114 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 TNFSF13O75888 250 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 CATR1Q13166 79 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 KIAA1644Q3SXP7 199 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 BAGE3Q86Y29 109 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 BAGE2Q86Y30 109 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 SEPSECSQ9HD40 501 aaKnown RBP11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 BOKQ9UMX3 212 aaPredicted RBP11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 KMT2EQ8IZD2 1858 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 RAB29O14966 203 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 TPPP2P59282 170 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 UBE2NP61088 152 aaKnown RBP11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 RPL31P62899 125 aaKnown RBP11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 CFAP47Q6ZTR5 3102 aa11.58□□□□□ -0.56
SCNN1A-215ENST00000540037 FCN1O00602 326 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 NTN3O00634 580 aaPredicted RBP11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 PROP1O75360 226 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 LINC00696Q6ZRV3 163 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 OR13A1Q8NGR1 328 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 OR1L6Q8NGR2 347 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 CT55Q8WUE5 264 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 NINJ1Q92982 152 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 CIB3Q96Q77 187 aaPredicted RBP11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 LRFN3Q9BTN0 628 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 SAMD10Q9BYL1 202 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 FBXL7Q9UJT9 491 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 TMEM30CPA0ZSE6 113 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 FCGR3BO75015 233 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 Q8TCH9 128 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 C1orf159Q96HA4 380 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 TTTY12Q9BZ98 90 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 POLDIP2Q9Y2S7 368 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 KRTDAPP60985 99 aa11.57□□□□□ -0.56
SCNN1A-215ENST00000540037 SELENOTP62341 195 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms