RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 VTCN1Q7Z7D3 282 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 OR1N2Q8NGR9 330 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 DDB2Q92466 427 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 DAZAP1Q96EP5 407 aaKnown RBP6.2□□□□□ -1.42
GNE-205ENST00000539815 SNX22Q96L94 193 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 AURKAIP1Q9NWT8 199 aaPredicted RBP6.2□□□□□ -1.42
GNE-205ENST00000539815 TXNL4BQ9NX01 149 aaKnown RBP6.2□□□□□ -1.42
GNE-205ENST00000539815 SLC2A8Q9NY64 477 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 HMSDA8MTL9 139 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 GEMIN2O14893 280 aaKnown RBP6.2□□□□□ -1.42
GNE-205ENST00000539815 DFFBO76075 338 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 DIRAS1O95057 198 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 CD28P10747 220 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 PRDX2P32119 198 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 RPS27P42677 84 aaKnown RBP6.2□□□□□ -1.42
GNE-205ENST00000539815 CKS1BP61024 79 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 ZNF92Q03936 586 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 UBE2V2Q15819 145 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 PCK2Q16822 640 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 TMEM182Q6ZP80 229 aaPredicted RBP6.2□□□□□ -1.42
GNE-205ENST00000539815 VCX2Q9H322 139 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 FRRS1LQ9P0K9 344 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 SLC45A2Q9UMX9 530 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
GNE-205ENST00000539815 TNCP24821 2201 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 A0A087WUU8 490 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 MPPED1O15442 326 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 HPRT1P00492 218 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 NRASP01111 189 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 TRGC1P0CF51 173 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 MGMTP16455 207 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 H2BFSP57053 126 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 UBE2KP61086 200 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 PLAURQ03405 335 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 SMAGPQ0VAQ4 97 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 MMDQ15546 238 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 C1orf194Q5T5A4 169 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 ZNRF1Q8ND25 227 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 FAM110AQ9BQ89 295 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 ABHD14AQ9BUJ0 271 aa6.2□□□□□ -1.42
GNE-205ENST00000539815 KIR2DL5BA0A0G2JN68 375 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 KIR2DL5BA0A0G2JPC4 375 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 C3orf84H3BNL1 204 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ELK1P19419 428 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ARL3P36405 182 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 RAB11BQ15907 218 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 C11orf87Q6NUJ2 197 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ZNF343Q6P1L6 599 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 LCNL1Q6ZST4 164 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ZNF546Q86UE3 836 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 KIR2DL5AQ8N109 375 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 GBGT1Q8N5D6 347 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ACBD7Q8N6N7 88 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 GNG12Q9UBI6 72 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 C14orf166Q9Y224 244 aaKnown RBP6.19□□□□□ -1.42
GNE-205ENST00000539815 SLC22A13Q9Y226 551 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 GYPBP06028 91 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ANOS1P23352 680 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 Q6ZR03 302 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ZNF329Q86UD4 541 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ZNF695Q8IW36 515 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 OR52B4Q8NGK2 314 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 TSEN15Q8WW01 171 aaKnown RBP6.19□□□□□ -1.42
GNE-205ENST00000539815 PIGLQ9Y2B2 252 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 URGCP-MRPS24S4R325 110 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 SH2D1BO14796 132 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ACTL6BO94805 426 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 ZNF121P58317 390 aaPredicted RBP6.19□□□□□ -1.42
GNE-205ENST00000539815 ZNF260Q3ZCT1 412 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 TMEM268Q5VZI3 342 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 MRPL41Q8IXM3 137 aaKnown RBP6.19□□□□□ -1.42
GNE-205ENST00000539815 TMEM163Q8TC26 289 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 SECTM1Q8WVN6 248 aa6.19□□□□□ -1.42
GNE-205ENST00000539815 A0A1B0GU03 582 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 CORTO00230 105 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 SYT7O43581 403 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 MMP23AO75900 390 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 TOMM40O96008 361 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 CTSDP07339 412 aaPredicted RBP6.18□□□□□ -1.42
GNE-205ENST00000539815 CXCL1P09341 107 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 TMEM225BP0DP42 221 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 Q6ZPA2 131 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 COMMD1Q8N668 190 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 OR56B4Q8NH76 319 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 FRZBQ92765 325 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 F5H0A9 414 aaPredicted RBP6.18□□□□□ -1.42
GNE-205ENST00000539815 SYNGR1O43759 233 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 MPZL2O60487 215 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 OR2F2O95006 317 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 OR2C1O95371 312 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 SEMG1P04279 462 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 MVDP53602 400 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 RELBQ01201 579 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 TPBGQ13641 420 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 GLYATL3Q5SZD4 288 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 TOMM5Q8N4H5 51 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 SMIM20Q8N5G0 67 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 GCSAMQ8N6F7 178 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 GPR32P1Q8NGA4 272 aa6.18□□□□□ -1.42
GNE-205ENST00000539815 OR4S2Q8NH73 311 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms