RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SYNJ2BPP57105 145 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 RPS16P62249 146 aaKnown RBP6.55□□□□□ -1.36
PABPC1-202ENST00000517403 KLF5Q13887 457 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-202ENST00000517403 PLGLAQ15195 96 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 OR2B11Q5JQS5 317 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 C22orf42Q6IC83 251 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 ZNF343Q6P1L6 599 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 ZNF773Q6PK81 442 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 ZNF429Q86V71 674 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 OR4A4PQ8NGN8 299 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 OR10R2Q8NGX6 335 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 MUC7Q8TAX7 377 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 THRSPQ92748 146 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 SLC25A38Q96DW6 304 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 CNBD2Q96M20 576 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 HARBI1Q96MB7 349 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 CHCHD6Q9BRQ6 235 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 CCDC90BQ9GZT6 254 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.55□□□□□ -1.36
PABPC1-202ENST00000517403 S4R3C0 116 aa6.55□□□□□ -1.36
PABPC1-202ENST00000517403 HMX3A6NHT5 357 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 HSPA12AO43301 675 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 TMEM127O75204 238 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 RBBP9O75884 186 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 CRYZL1O95825 349 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 HLA-AP01891 365 aaKnown RBP6.54□□□□□ -1.36
PABPC1-202ENST00000517403 HSPB1P04792 205 aaKnown RBP6.54□□□□□ -1.36
PABPC1-202ENST00000517403 NFYAP23511 347 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-202ENST00000517403 MC5RP33032 325 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 INSL3P51460 131 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 PITPNAQ00169 270 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 ZNF367Q7RTV3 350 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 OR5H6Q8NGV6 325 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 CACNG8Q8WXS5 425 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 RAB3CQ96E17 227 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 FAM110AQ9BQ89 295 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 URM1Q9BTM9 101 aaKnown RBP6.54□□□□□ -1.36
PABPC1-202ENST00000517403 C1orf43Q9BWL3 253 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 TINAGL1Q9GZM7 467 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-202ENST00000517403 ZNF430Q9H8G1 570 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-202ENST00000517403 AKIP1Q9NQ31 210 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 DNAH1Q9P2D7 4330 aa6.54□□□□□ -1.36
PABPC1-202ENST00000517403 TRBV9A0A0B4J1U6 114 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 TRAV1-2A0A0B4J238 106 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 TRDV1A0A1B0GX56 115 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 TMEM235A6NFC5 223 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 FCER2P06734 321 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 AREGP15514 252 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 MALP21145 153 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 PRSS8Q16651 343 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 LINC00322Q6ZN03 302 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-202ENST00000517403 TCTEX1D1Q8N7M0 179 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-202ENST00000517403 OR56B1Q8NGI3 324 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 LGALS14Q8TCE9 139 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 SRSF12Q8WXF0 261 aaKnown RBP6.53□□□□□ -1.36
PABPC1-202ENST00000517403 FLYWCH2Q96CP2 140 aaKnown RBP6.53□□□□□ -1.36
PABPC1-202ENST00000517403 CENPOQ9BU64 300 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 RIMS4Q9H426 269 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-202ENST00000517403 SCN3BQ9NY72 215 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 ZNF221Q9UK13 617 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 TPRKBQ9Y3C4 175 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 LRRC42Q9Y546 428 aa6.53□□□□□ -1.36
PABPC1-202ENST00000517403 PLECQ15149 4684 aaKnown RBP6.52□□□□□ -1.37
PABPC1-202ENST00000517403 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 LCE6AA0A183 80 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 MSGN1A6NI15 193 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 PPP5D1E7EU14 171 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 ARL6IP5O75915 188 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 TNFRSF6BO95407 300 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 IGHV3-23P01764 117 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 APOA2P02652 100 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 IL6RP08887 468 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-202ENST00000517403 CD7P09564 240 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 EXOSC2Q13868 293 aaKnown RBP6.52□□□□□ -1.37
PABPC1-202ENST00000517403 TNXAQ16473 311 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 HAGHQ16775 308 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 UBE2UQ5VVX9 321 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 TEPPQ6URK8 271 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 Q6ZS49 121 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 SPARTQ8N0X7 666 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 GVQW1Q8N7I0 195 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 OR9G4Q8NGQ1 327 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 TSNAXQ99598 290 aaKnown RBP6.52□□□□□ -1.37
PABPC1-202ENST00000517403 RNF5Q99942 180 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 OR51E2Q9H255 320 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 SLA2Q9H6Q3 261 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 PLEKHA3Q9HB20 300 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 TXNL4BQ9NX01 149 aaKnown RBP6.52□□□□□ -1.37
PABPC1-202ENST00000517403 RAB22AQ9UL26 194 aa6.52□□□□□ -1.37
PABPC1-202ENST00000517403 RBMY1BA6NDE4 496 aaKnown RBP6.51□□□□□ -1.37
PABPC1-202ENST00000517403 RBMY1EA6NEQ0 496 aaKnown RBP6.51□□□□□ -1.37
PABPC1-202ENST00000517403 ZNF785A8K8V0 405 aa6.51□□□□□ -1.37
PABPC1-202ENST00000517403 A8MZ25 164 aa6.51□□□□□ -1.37
PABPC1-202ENST00000517403 C3orf84H3BNL1 204 aa6.51□□□□□ -1.37
PABPC1-202ENST00000517403 H3BUA1 57 aa6.51□□□□□ -1.37
PABPC1-202ENST00000517403 OR2J3O76001 311 aa6.51□□□□□ -1.37
PABPC1-202ENST00000517403 RBMY1DP0C7P1 496 aaKnown RBP6.51□□□□□ -1.37
PABPC1-202ENST00000517403 RAB3BP20337 219 aa6.51□□□□□ -1.37
PABPC1-202ENST00000517403 UBE2KP61086 200 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms