RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 EDARADDQ8WWZ3 215 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 NINJ1Q92982 152 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 BBC3Q96PG8 261 aaPredicted RBP9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 OR5B12Q96R08 314 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 SMIM7Q9BQ49 75 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 CHD3Q12873 2000 aaKnown RBP9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 SMCO3A2RU48 225 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 VENTXO95231 258 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 CLDN14O95500 239 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 GLRXP35754 106 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 KLF3P57682 345 aaPredicted RBP9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 IZUMO4Q1ZYL8 232 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 TRAT1Q6PIZ9 186 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 ACP7Q6ZNF0 438 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 C1orf174Q8IYL3 243 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 ZNF709Q8N972 641 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 OR10D4PQ8NGN7 298 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 ABHD5Q8WTS1 349 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 LRBAP50851 2863 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 UBE2L5PA0A1B0GUS4 154 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 IGHV3-13P01766 116 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 SFTPCP11686 197 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 CD40P25942 277 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 FGF8P55075 233 aaPredicted RBP9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 GNB2P62879 340 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 LY6DQ14210 128 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 VWC2Q2TAL6 325 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 TMEM249Q2WGJ8 235 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 BSXQ3C1V8 233 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 SPNS3Q6ZMD2 512 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 RPP25LQ8N5L8 163 aaKnown RBP9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 FRZBQ92765 325 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 METRNQ9UJH8 293 aa9.17□□□□□ -0.94
SH3RF1-203ENST00000508685 KIAA2026Q5HYC2 2103 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 C16orf97H3BN30 126 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 IFNL4K9M1U5 179 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 IFNA10P01566 189 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 PFN1P07737 140 aaKnown RBP9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 ELLP55199 621 aaPredicted RBP9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 RPP30P78346 268 aaKnown RBP9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 MZT1Q08AG7 82 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 EIF4EBP1Q13541 118 aaPredicted RBP9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 C3orf36Q3SXR2 165 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 OR8G2PQ6IF36 304 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 OR10G9Q8NGN4 311 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 OR10G7Q8NGN6 311 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 LRRC29Q8WV35 223 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 LURAP1Q96LR2 239 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 OR2V2Q96R30 315 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 HSD17B10Q99714 261 aaKnown RBP9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 POLEQ07864 2286 aa9.16□□□□□ -0.94
SH3RF1-203ENST00000508685 IGLV3-9A0A075B6K5 115 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 FAM90A9PA6NNJ1 464 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 PHOX2AO14813 284 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 SPRY3O43610 288 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 EGR1P18146 543 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 AESQ08117 197 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 ACOT6Q3I5F7 207 aaPredicted RBP9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 SSX7Q7RTT5 188 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 WFDC8Q8IUA0 241 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 TMEM183AQ8IXX5 376 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 TPRX1Q8N7U7 411 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 ZNF383Q8NA42 475 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 ACY3Q96HD9 319 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 TXNDC17Q9BRA2 123 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 GPR61Q9BZJ8 451 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 CFAP46Q8IYW2 2715 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 PMS2P5A8MQ11 134 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 H7BYZ3 331 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 DVL1O14640 695 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 SOD3P08294 240 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 FGF7P21781 194 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 SRP14P37108 136 aaKnown RBP9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 OR3A1P47881 315 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 FAM3BP58499 235 aaPredicted RBP9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 DEFA6Q01524 100 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 PAX5Q02548 391 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 ADIRFQ15847 76 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 SMIM21Q3B7S5 101 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 COA6Q5JTJ3 125 aaKnown RBP9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 H2BFWTQ7Z2G1 175 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 LINC00469Q8N7U9 141 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 OR5R1Q8NH85 324 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 RNASEH2CQ8TDP1 164 aaKnown RBP9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 DTD1Q8TEA8 209 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 DIRC2Q96SL1 478 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 OR2D2Q9H210 308 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 JKAMPQ9P055 326 aa9.15□□□□□ -0.94
SH3RF1-203ENST00000508685 CACNA1DQ01668 2161 aa9.15□□□□□ -0.95
SH3RF1-203ENST00000508685 ODAMA1E959 279 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 C12orf77C9JDV5 145 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 PPP5D1E7EU14 171 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 MPDU1O75352 247 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 KRASP01116 189 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 HBZP02008 142 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 THBDP07204 575 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 ADH4P08319 380 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 PKIAP61925 76 aa9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 RPL23P62829 140 aaKnown RBP9.14□□□□□ -0.95
SH3RF1-203ENST00000508685 COL10A1Q03692 680 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms