RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 EBPQ15125 230 aaKnown RBP3.86□□□□□ -1.79
NIPBL-204ENST00000504430 TGIF1Q15583 401 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 LAIR2Q6ISS4 152 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF664Q8N3J9 261 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 Q8NBF4 154 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 OR5C1Q8NGR4 320 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 VSIG2Q96IQ7 327 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 MYO5BQ9ULV0 1848 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 NALCNQ8IZF0 1738 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 OVOS2A0A0G2JMS6 1433 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 PMS2P5A8MQ11 134 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 IFNA17P01571 189 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 GYPCP04921 128 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 TAS2R19P59542 299 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 S100A10P60903 97 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 FBXL19-AS1Q494R0 122 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 SNX12Q9UMY4 172 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 POLEQ07864 2286 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 ABCA7Q8IZY2 2146 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 TRAV41A0A0B4J266 112 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 LMO2P25791 158 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 OPRK1P41145 380 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 CCR2P41597 374 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF140P52738 457 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-204ENST00000504430 CXCL6P80162 114 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 PSG9Q00887 426 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 FABP9Q0Z7S8 132 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 CST6Q15828 149 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 CLLU1OSQ5K130 101 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 BCL2L15Q5TBC7 163 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 SMIM29Q86T20 159 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 IFT20Q8IY31 132 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 TEX29Q8N6K0 151 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 TERB2Q8NHR7 220 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 STAG3L4Q8TBR4 150 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 ORAOV1Q8WV07 137 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF501Q96CX3 271 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-204ENST00000504430 MRPL57Q9BQC6 102 aaKnown RBP3.86□□□□□ -1.79
NIPBL-204ENST00000504430 SVILO95425 2214 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 NUP210Q8TEM1 1887 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 FAM135BQ49AJ0 1406 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 TRDV1A0A1B0GX56 115 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 RSPO1Q2MKA7 263 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 GLT8D1Q68CQ7 371 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 TCTEX1D1Q8N7M0 179 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 AP1S3Q96PC3 154 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 TMEM216Q9P0N5 145 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 KLK13Q9UKR3 277 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 DIDO1Q9BTC0 2240 aaKnown RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 CABIN1Q9Y6J0 2220 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 A8MWP6 167 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 LY6LH3BQJ8 138 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 NTN3O00634 580 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 NPFFO15130 113 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 HIST1H1BP16401 226 aaKnown RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF239Q16600 458 aaKnown RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 MRPL2Q5T653 305 aaKnown RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 SAXO1Q8IYX7 474 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 Q8N1X5 172 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 RAB2BQ8WUD1 216 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 UBQLN4Q9NRR5 601 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 NAT8Q9UHE5 227 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 RALGAPA2Q2PPJ7 1873 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 MBD5Q9P267 1494 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 TRAV8-1A0A0A6YYK1 113 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 A0A0X1KG70 313 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 C9JQL5 133 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 GSTZ1O43708 216 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 IMPA1P29218 277 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF440Q8IYI8 595 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 OR51T1Q8NGJ9 327 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 VN1R17PQ8TDU5 208 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 ITLN1Q8WWA0 313 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 MAL2Q969L2 176 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 SLC25A2Q9BXI2 301 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 POLR2J2Q9GZM3 115 aaKnown RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 POLR2J3Q9H1A7 115 aaKnown RBP3.85□□□□□ -1.79
NIPBL-204ENST00000504430 PRO1933Q9H354 126 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 PTGES2Q9H7Z7 377 aa3.85□□□□□ -1.79
NIPBL-204ENST00000504430 SSH2Q76I76 1423 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 MYO10Q9HD67 2058 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 A0A1B0GV50 99 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 COX7A2LO14548 114 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 CFC1BP0CG36 223 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 GABRA3P34903 492 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 LINC00205P59089 165 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 GNB1P62873 340 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 KRTAP27-1Q3LI81 207 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 TMEM14EPQ6UXP3 125 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 OR4A5Q8NH83 315 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 COX11Q9Y6N1 276 aa3.84□□□□□ -1.79
NIPBL-204ENST00000504430 IGHV4-30-2A0A087WSY4 118 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 MPTX1A8MV57 137 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 UPK2O00526 184 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 SCTP09683 121 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 MMGT1Q8N4V1 131 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 WFDC11Q8NEX6 87 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 OR5A1Q8NGJ0 315 aa3.84□□□□□ -1.8
NIPBL-204ENST00000504430 OR4C16Q8NGL9 310 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms