RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	CCDC140	Q96MF4	163 aa		10.23	□□□□□ -0.77
SAMM50-204	ENST00000493161	GGTLC1	Q9BX51	225 aa		10.23	□□□□□ -0.77
SAMM50-204	ENST00000493161	DNAH10	Q8IVF4	4471 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	TMEM213	A2RRL7	107 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161		E7EUB6	86 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	LGALS9	O00182	355 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	GGCT	O75223	188 aa	Known RBP	10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	SCAF4	O95104	1147 aa	Known RBP	10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	RRAS	P10301	218 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	RAB11B	Q15907	218 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	C2orf76	Q3KRA6	126 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	SLC16A13	Q7RTY0	426 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	VKORC1L1	Q8N0U8	176 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	FBXL7	Q9UJT9	491 aa		10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	RBM7	Q9Y580	266 aa	Known RBP	10.22	□□□□□ -0.77
SAMM50-204	ENST00000493161	IGKV1D-8	A0A087WSZ0	117 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	TMEM272	A0A1B0GTI8	110 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161		A0A1B0GW64	132 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	TEX22	C9J3V5	150 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161		J3QRK9	145 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	NDUFB8	O95169	186 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	CDK1	P06493	297 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	CDK10	Q15131	360 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	LIPK	Q5VXJ0	399 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	ZNF57	Q68EA5	555 aa	Predicted RBP	10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	CLEC19A	Q6UXS0	136 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	GPHB5	Q86YW7	130 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	OR56B1	Q8NGI3	324 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	OR52B4	Q8NGK2	314 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	FAM3D	Q96BQ1	224 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	SPIN2A	Q99865	258 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	SPIN2B	Q9BPZ2	258 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	MND1	Q9BWT6	205 aa		10.21	□□□□□ -0.77
SAMM50-204	ENST00000493161	KMT2A	Q03164	3969 aa		10.21	□□□□□ -0.78
SAMM50-204	ENST00000493161	ZNF320	A2RRD8	509 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	NUPR2	A6NF83	97 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	DENR	O43583	198 aa	Known RBP	10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	DEDD	O75618	318 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	IL6R	P08887	468 aa	Predicted RBP	10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	GNB3	P16520	340 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	ARL3	P36405	182 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	RPS25	P62851	125 aa	Known RBP	10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	SPHAR	Q15513	63 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	MED22	Q15528	200 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	TM4SF20	Q53R12	229 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	OR2B11	Q5JQS5	317 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	BTNL8	Q6UX41	500 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	LYG2	Q86SG7	212 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	UXS1	Q8NBZ7	420 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	OSR1	Q8TAX0	266 aa	Predicted RBP	10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	ADTRP	Q96IZ2	230 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161	FANCD2OS	Q96PS1	177 aa		10.2	□□□□□ -0.78
SAMM50-204	ENST00000493161		A0A075B6Q4	140 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	PTGES3L	E9PB15	166 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	FCGR3B	O75015	233 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	ACTL6B	O94805	426 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	AREG	P15514	252 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	RPL30	P62888	115 aa	Known RBP	10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	TPBG	Q13641	420 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	HES5	Q5TA89	166 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	UNQ9165/PRO28630	Q6UXU0	137 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	MMD2	Q8IY49	270 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	PACRGL	Q8N7B6	248 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	RAB3C	Q96E17	227 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	GINS4	Q9BRT9	223 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	DCUN1D5	Q9BTE7	237 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	ELF5	Q9UKW6	265 aa	Predicted RBP	10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	ZNF257	Q9Y2Q1	563 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161	KIAA1109	Q2LD37	5005 aa		10.19	□□□□□ -0.78
SAMM50-204	ENST00000493161		A8MWP6	167 aa		10.18	□□□□□ -0.78
SAMM50-204	ENST00000493161	MYOD1	P15172	320 aa		10.18	□□□□□ -0.78
SAMM50-204	ENST00000493161	MRPS15	P82914	257 aa	Known RBP	10.18	□□□□□ -0.78
SAMM50-204	ENST00000493161	TNFRSF9	Q07011	255 aa		10.18	□□□□□ -0.78
SAMM50-204	ENST00000493161	DEFB135	Q30KP9	77 aa		10.18	□□□□□ -0.78
SAMM50-204	ENST00000493161	WFDC3	Q8IUB2	231 aa		10.18	□□□□□ -0.78
SAMM50-204	ENST00000493161	FYTTD1	Q96QD9	318 aa	Known RBP	10.18	□□□□□ -0.78
SAMM50-204	ENST00000493161	MFSD2B	A6NFX1	497 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	NPIPB5	A8MRT5	1133 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	MFNG	O00587	321 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	SPRY2	O43597	315 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	DIRAS3	O95661	229 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	IGLV2-14	P01704	120 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	REG1A	P05451	166 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	CALR	P27797	417 aa	Known RBP	10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	BRWD1-AS2	P59051	145 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	IRF3	Q14653	427 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	FAM106A	Q4KMX7	169 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	FAM209B	Q5JX69	171 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	SLC25A42	Q86VD7	318 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	OR10R2	Q8NGX6	335 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	UFD1	Q92890	307 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	OR51E2	Q9H255	320 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	SLC2A9	Q9NRM0	540 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	UBQLN2	Q9UHD9	624 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	RAB22A	Q9UL26	194 aa		10.17	□□□□□ -0.78
SAMM50-204	ENST00000493161	IGKV1D-13	A0A0B4J2D9	117 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms