RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 CGB7P0DN87 165 aa11.78□□□□□ -0.52
ABCB1-207ENST00000488737 LTC4SQ16873 150 aa11.78□□□□□ -0.52
ABCB1-207ENST00000488737 NCMAPQ5T1S8 102 aa11.78□□□□□ -0.52
ABCB1-207ENST00000488737 C1orf185Q5T7R7 199 aa11.78□□□□□ -0.52
ABCB1-207ENST00000488737 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
ABCB1-207ENST00000488737 MOGAT3Q86VF5 341 aa11.78□□□□□ -0.52
ABCB1-207ENST00000488737 RAB1CQ92928 201 aa11.78□□□□□ -0.52
ABCB1-207ENST00000488737 CALYQ9NYX4 217 aa11.78□□□□□ -0.52
ABCB1-207ENST00000488737 SPTBN4Q9H254 2564 aa11.77□□□□□ -0.52
ABCB1-207ENST00000488737 ELOA3CA0A087WX78 387 aaPredicted RBP11.77□□□□□ -0.53
ABCB1-207ENST00000488737 TM4SF5O14894 197 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST1H2BKO60814 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST1H2BJP06899 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST1H2BOP23527 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 CD1BP29016 333 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST1H2BBP33778 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 TIMP3P35625 211 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 CDC34P49427 236 aaPredicted RBP11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST1H2BDP58876 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST1H2BCP62807 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST2H2BEQ16778 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 SPINK9Q5DT21 86 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.77□□□□□ -0.53
ABCB1-207ENST00000488737 Q6ZS92 163 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 Q8N7P7 452 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST1H2BHQ93079 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 S1PR3Q99500 378 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST1H2BNQ99877 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 HIST1H2BMQ99879 126 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 OR51M1Q9H341 326 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 NIT2Q9NQR4 276 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 FAM215AQ9Y5M1 114 aa11.77□□□□□ -0.53
ABCB1-207ENST00000488737 IGHV3OR15-7A0A075B7D8 119 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 TRGV8A0A0C4DH27 118 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 TRGC2P03986 189 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 VDAC2P45880 294 aaPredicted RBP11.76□□□□□ -0.53
ABCB1-207ENST00000488737 NDUFA6P56556 154 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 TMPRSS3P57727 454 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 BSXQ3C1V8 233 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 OR4S2Q8NH73 311 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 Q8TCH9 128 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 DDB2Q92466 427 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 YIF1AO95070 293 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 VENTXO95231 258 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 EDDM3BP56851 147 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 RPL23P62829 140 aaKnown RBP11.76□□□□□ -0.53
ABCB1-207ENST00000488737 RELBQ01201 579 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 TLE1Q04724 770 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 HNF4GQ14541 408 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 ADIRFQ15847 76 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 RPL39P5Q59GN2 51 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 ZNRF1Q8ND25 227 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 OR4F5Q8NH21 305 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 ITLN1Q8WWA0 313 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 NEIL1Q96FI4 390 aaPredicted RBP11.76□□□□□ -0.53
ABCB1-207ENST00000488737 SDSLQ96GA7 329 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 OR4F4Q96R69 305 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 SFXN3Q9BWM7 321 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 PARLQ9H300 379 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 GFOD1Q9NXC2 390 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 DSCAMO60469 2012 aa11.76□□□□□ -0.53
ABCB1-207ENST00000488737 TET2Q6N021 2002 aaPredicted RBP11.76□□□□□ -0.53
ABCB1-207ENST00000488737 SVILO95425 2214 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 PRRC2CQ9Y520 2896 aaKnown RBP11.75□□□□□ -0.53
ABCB1-207ENST00000488737 HMGB3O15347 200 aaKnown RBP11.75□□□□□ -0.53
ABCB1-207ENST00000488737 IFNA10P01566 189 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 FABP1P07148 127 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 S100PP25815 95 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 OPRK1P41145 380 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 ZNF134P52741 427 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 RPS16P62249 146 aaKnown RBP11.75□□□□□ -0.53
ABCB1-207ENST00000488737 C17orf58Q2M2W7 97 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 TMEM30BQ3MIR4 351 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 RPUSD4Q96CM3 377 aaKnown RBP11.75□□□□□ -0.53
ABCB1-207ENST00000488737 ADTRPQ96IZ2 230 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 PYGO2Q9BRQ0 406 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 HEYLQ9NQ87 328 aaPredicted RBP11.75□□□□□ -0.53
ABCB1-207ENST00000488737 GSN-AS1Q9NRJ2 163 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 GAR1Q9NY12 217 aaKnown RBP11.75□□□□□ -0.53
ABCB1-207ENST00000488737 RNF7Q9UBF6 113 aa11.75□□□□□ -0.53
ABCB1-207ENST00000488737 KBTBD11-OT1A0A1B0GTJ5 212 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 PRSS46E5RG02 174 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 PHOX2AO14813 284 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 SPRY3O43610 288 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 CRYABP02511 175 aaKnown RBP11.74□□□□□ -0.53
ABCB1-207ENST00000488737 PFN1P07737 140 aaKnown RBP11.74□□□□□ -0.53
ABCB1-207ENST00000488737 S100A2P29034 98 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 SELENOVP59797 346 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 SPRNQ5BIV9 151 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 C16orf82Q7Z2V1 217 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 TGIF2LYQ8IUE0 185 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 ANAPC16Q96DE5 110 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 SSX3Q99909 188 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 KCNIP2Q9NS61 270 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 TMEM140Q9NV12 185 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 IL19Q9UHD0 177 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 IFITM10A6NMD0 228 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 PAGE4O60829 102 aa11.74□□□□□ -0.53
ABCB1-207ENST00000488737 CEACAM8P31997 349 aaPredicted RBP11.74□□□□□ -0.53
ABCB1-207ENST00000488737 THBS3P49746 956 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms