RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ZNF355PQ9NSJ1 428 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 MRPS7Q9Y2R9 242 aaKnown RBP13.2□□□□□ -0.3
SSBP1-207ENST00000468267 MSGN1A6NI15 193 aa13.19□□□□□ -0.3
SSBP1-207ENST00000468267 OVOL1O14753 267 aa13.19□□□□□ -0.3
SSBP1-207ENST00000468267 BRI3O95415 125 aa13.19□□□□□ -0.3
SSBP1-207ENST00000468267 SAA1P0DJI8 122 aaPredicted RBP13.19□□□□□ -0.3
SSBP1-207ENST00000468267 SLURP1P55000 103 aa13.19□□□□□ -0.3
SSBP1-207ENST00000468267 MSMO1Q15800 293 aa13.19□□□□□ -0.3
SSBP1-207ENST00000468267 OR2B11Q5JQS5 317 aa13.19□□□□□ -0.3
SSBP1-207ENST00000468267 MFSD4AQ8N468 514 aa13.19□□□□□ -0.3
SSBP1-207ENST00000468267 ZNF430Q9H8G1 570 aaPredicted RBP13.19□□□□□ -0.3
SSBP1-207ENST00000468267 C13orf42A0A1B0GVH6 325 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 FCER2P06734 321 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 ECI1P42126 302 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 BRWD1-AS2P59051 145 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 DCTN2Q13561 401 aaKnown RBP13.18□□□□□ -0.3
SSBP1-207ENST00000468267 CDK10Q15131 360 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 TNXAQ16473 311 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 TMEM69Q5SWH9 247 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 ZNF66Q6ZN08 573 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 OR5AP2Q8NGF4 316 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 OR13F1Q8NGS4 319 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 OR4S2Q8NH73 311 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 SECTM1Q8WVN6 248 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 TCTEX1D2Q8WW35 142 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 PHB2Q99623 299 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 TINAGL1Q9GZM7 467 aaPredicted RBP13.18□□□□□ -0.3
SSBP1-207ENST00000468267 CCL28Q9NRJ3 127 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 TAS2R8Q9NYW2 309 aa13.18□□□□□ -0.3
SSBP1-207ENST00000468267 A0A0G2JLM5 398 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 MEIS3P1A6NDR6 274 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 CREBL2O60519 120 aaPredicted RBP13.17□□□□□ -0.3
SSBP1-207ENST00000468267 PPYP01298 95 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 TAS2R20P59543 309 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 NCS1P62166 190 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 ZNF429Q86V71 674 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 MMD2Q8IY49 270 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 GIMAP1Q8WWP7 306 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 SRSF12Q8WXF0 261 aaKnown RBP13.17□□□□□ -0.3
SSBP1-207ENST00000468267 ACOT12Q8WYK0 555 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 GPHA2Q96T91 129 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 IFT46Q9NQC8 304 aa13.17□□□□□ -0.3
SSBP1-207ENST00000468267 ACTL6BO94805 426 aa13.16□□□□□ -0.3
SSBP1-207ENST00000468267 APELAP0DMC3 54 aa13.16□□□□□ -0.3
SSBP1-207ENST00000468267 VBP1P61758 197 aa13.16□□□□□ -0.3
SSBP1-207ENST00000468267 VKORC1L1Q8N0U8 176 aa13.16□□□□□ -0.3
SSBP1-207ENST00000468267 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
SSBP1-207ENST00000468267 ADAD2Q8NCV1 583 aaKnown RBP13.16□□□□□ -0.3
SSBP1-207ENST00000468267 PRR25Q96S07 402 aa13.16□□□□□ -0.3
SSBP1-207ENST00000468267 SLC5A7Q9GZV3 580 aa13.16□□□□□ -0.3
SSBP1-207ENST00000468267 COA4Q9NYJ1 87 aa13.16□□□□□ -0.3
SSBP1-207ENST00000468267 ANAPC10Q9UM13 185 aa13.16□□□□□ -0.3
SSBP1-207ENST00000468267 TENM3Q9P273 2699 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 OR2A4O95047 310 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 OR9G9P0C7N8 305 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 NAT1P18440 290 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 KIR2DS2P43631 304 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 ACSM6Q6P461 480 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 PUSL1Q8N0Z8 303 aaKnown RBP13.15□□□□□ -0.3
SSBP1-207ENST00000468267 OR2A7Q96R45 310 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 SPIN2AQ99865 258 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 B9D2Q9BPU9 175 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 SPIN2BQ9BPZ2 258 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 RANGRFQ9HD47 186 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-207ENST00000468267 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.3
SSBP1-207ENST00000468267 ZNF256Q9Y2P7 627 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-207ENST00000468267 LSM4Q9Y4Z0 139 aaKnown RBP13.15□□□□□ -0.3
SSBP1-207ENST00000468267 MPPED1O15442 326 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 TNFSF12O43508 249 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 SAP30O75446 220 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 KBTBD11O94819 623 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 HRASP01112 189 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 APOA1P02647 267 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 EIF4EP06730 217 aaKnown RBP13.14□□□□□ -0.31
SSBP1-207ENST00000468267 SMIM18P0DKX4 95 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 PRSS3P35030 304 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 FXYD4P59646 89 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 DHRS11Q6UWP2 260 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 VSTM2AQ8TAG5 236 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 TMEM167AQ8TBQ9 72 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 USMG5Q96IX5 58 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 CMTM3Q96MX0 182 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 EHFQ9NZC4 300 aa13.14□□□□□ -0.31
SSBP1-207ENST00000468267 ANKRD34BA5PLL1 514 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 RBFOX2O43251 390 aaKnown RBP eCLIP13.13□□□□□ -0.31
SSBP1-207ENST00000468267 RBMXL2O75526 392 aaKnown RBP13.13□□□□□ -0.31
SSBP1-207ENST00000468267 ZP3P21754 424 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 RFX2P48378 723 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 CD69Q07108 199 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 DYRK1AQ13627 763 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 C10orf55Q5SWW7 151 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 ZNF343Q6P1L6 599 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 ZNF818PQ6ZRF7 136 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 ANKRD13BQ86YJ7 626 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 TTC9CQ8N5M4 171 aa13.13□□□□□ -0.31
SSBP1-207ENST00000468267 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 SULT1C2O00338 296 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 PMP2P02689 132 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 MAS1LP35410 378 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 RORCP51449 518 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms