RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SEC11CQ9BY50 192 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 BIN3Q9NQY0 253 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 KAAG1Q9UBP8 84 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 FBXO7Q9Y3I1 522 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 CFAP46Q8IYW2 2715 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 ZG16O60844 167 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 GNLYP22749 145 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 MEOX2P50222 304 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 TMEM30BQ3MIR4 351 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 LRRC10Q5BKY1 277 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 OR8G2PQ6IF36 304 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 ZNF525Q8N782 197 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 H1FXQ92522 213 aaKnown RBP15□□□□□ -0.01
COL9A3-205ENST00000466192 CARHSP1Q9Y2V2 147 aaKnown RBP15□□□□□ -0.01
COL9A3-205ENST00000466192 IGSF10Q6WRI0 2623 aa14.99□□□□□ -0.01
COL9A3-205ENST00000466192 GPR37O15354 613 aa14.99□□□□□ -0.01
COL9A3-205ENST00000466192 HPRT1P00492 218 aa14.99□□□□□ -0.01
COL9A3-205ENST00000466192 VKORC1L1Q8N0U8 176 aa14.99□□□□□ -0.01
COL9A3-205ENST00000466192 LYG1Q8N1E2 194 aa14.99□□□□□ -0.01
COL9A3-205ENST00000466192 DDB2Q92466 427 aa14.99□□□□□ -0.01
COL9A3-205ENST00000466192 ZNF714Q96N38 554 aa14.99□□□□□ -0.01
COL9A3-205ENST00000466192 S1PR3Q99500 378 aa14.99□□□□□ -0.01
COL9A3-205ENST00000466192 EIF5A2Q9GZV4 153 aaKnown RBP14.99□□□□□ -0.01
COL9A3-205ENST00000466192 GAL3ST2Q9H3Q3 398 aa14.99□□□□□ -0.01
COL9A3-205ENST00000466192 TET2Q6N021 2002 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-205ENST00000466192 OR9G9P0C7N8 305 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 PPOXP50336 477 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 C4orf17Q53FE4 359 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 AKR1C8PQ5T2L2 129 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 LINC00469Q8N7U9 141 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-205ENST00000466192 DTD1Q8TEA8 209 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 RSG1Q9BU20 258 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 ZNRD1Q9P1U0 126 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 OR2B8PP59922 312 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 MRPS11P82912 194 aaKnown RBP14.98□□□□□ -0.01
COL9A3-205ENST00000466192 GUK1Q16774 197 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 DHRS7BQ6IAN0 325 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-205ENST00000466192 TMEM14EPQ6UXP3 125 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 SLC25A48Q6ZT89 311 aaKnown RBP14.98□□□□□ -0.01
COL9A3-205ENST00000466192 COMMD1Q8N668 190 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 SCGB1C1Q8TD33 95 aa14.98□□□□□ -0.01
COL9A3-205ENST00000466192 FAM157AC9JC47 383 aa14.97□□□□□ -0.01
COL9A3-205ENST00000466192 RBFOX2O43251 390 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL9A3-205ENST00000466192 HEPN1Q6WQI6 88 aa14.97□□□□□ -0.01
COL9A3-205ENST00000466192 OR10A7Q8NGE5 316 aa14.97□□□□□ -0.01
COL9A3-205ENST00000466192 ITLN2Q8WWU7 325 aaPredicted RBP14.97□□□□□ -0.01
COL9A3-205ENST00000466192 OR4C12Q96R67 309 aa14.97□□□□□ -0.01
COL9A3-205ENST00000466192 CEBPZOSA8MTT3 80 aa14.97□□□□□ -0.01
COL9A3-205ENST00000466192 PPT1P50897 306 aa14.97□□□□□ -0.01
COL9A3-205ENST00000466192 SLC38A11Q08AI6 406 aa14.97□□□□□ -0.01
COL9A3-205ENST00000466192 TMEM88Q6PEY1 159 aa14.97□□□□□ -0.01
COL9A3-205ENST00000466192 SCRT1Q9BWW7 348 aa14.97□□□□□ -0.01
COL9A3-205ENST00000466192 QTRT1Q9BXR0 403 aaKnown RBP14.97□□□□□ -0.01
COL9A3-205ENST00000466192 RBMXL1Q96E39 390 aaKnown RBP14.96□□□□□ -0.01
COL9A3-205ENST00000466192 DAOP14920 347 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 RPS16P62249 146 aaKnown RBP14.95□□□□□ -0.02
COL9A3-205ENST00000466192 CCL20P78556 96 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 ZNF383Q8NA42 475 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 CBLN4Q9NTU7 201 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 UBE2L5PA0A1B0GUS4 154 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 IFNA17P01571 189 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 IFNA4P05014 189 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 KIR2DS2P43631 304 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 ERVK-16P61578 105 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 PEA15Q15121 130 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 LRRC75BQ2VPJ9 315 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 MALRD1Q5VYJ5 2156 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 C11orf71Q6IPW1 123 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 FAM122AQ96E09 287 aa14.95□□□□□ -0.02
COL9A3-205ENST00000466192 LY6HO94772 140 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 SOD3P08294 240 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 NQO2P16083 231 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 THBS3P49746 956 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 SPSB3Q6PJ21 355 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 OR4A16Q8NH70 328 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 OR4S2Q8NH73 311 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 CIB3Q96Q77 187 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-205ENST00000466192 IGHV2-70P01814 119 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 NPBWR1P48145 328 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 DLX6P56179 175 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 HNF4GQ14541 408 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 LFNGQ8NES3 379 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 SFT2D1Q8WV19 159 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 PBDC1Q9BVG4 233 aa14.94□□□□□ -0.02
COL9A3-205ENST00000466192 WDR61Q9GZS3 305 aaKnown RBP14.94□□□□□ -0.02
COL9A3-205ENST00000466192 TRAV3A0A0B4J244 114 aa14.93□□□□□ -0.02
COL9A3-205ENST00000466192 A0A1W2PPR1 153 aa14.93□□□□□ -0.02
COL9A3-205ENST00000466192 PPIHO43447 177 aaKnown RBP14.93□□□□□ -0.02
COL9A3-205ENST00000466192 SNAPINO95295 136 aa14.93□□□□□ -0.02
COL9A3-205ENST00000466192 RAB1BQ9H0U4 201 aa14.93□□□□□ -0.02
COL9A3-205ENST00000466192 VSIRQ9H7M9 311 aa14.93□□□□□ -0.02
COL9A3-205ENST00000466192 TMEM140Q9NV12 185 aa14.93□□□□□ -0.02
COL9A3-205ENST00000466192 FSTL3O95633 263 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 TLE4Q04727 773 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 TMEM155Q4W5P6 130 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 AVPI1Q5T686 147 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 CBLN2Q8IUK8 224 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 OR10P1Q8NGE3 313 aa14.92□□□□□ -0.02
COL9A3-205ENST00000466192 ADTRPQ96IZ2 230 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms