RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 RPS14P62263 151 aaKnown RBP4.14□□□□□ -1.75
EPHA3-202ENST00000452448 MRPS6P82932 125 aaKnown RBP4.14□□□□□ -1.75
EPHA3-202ENST00000452448 KLF9Q13886 244 aaPredicted RBP4.14□□□□□ -1.75
EPHA3-202ENST00000452448 ATXN7L3Q14CW9 347 aaPredicted RBP4.14□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF141Q15928 474 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 C9orf57Q5W0N0 161 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 HMGN2P46Q86SG4 172 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 PRR22Q8IZ63 422 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 GJC3Q8NFK1 279 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 VSTM2AQ8TAG5 236 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 TVP23CQ96ET8 276 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 ATXN7L3BQ96GX2 97 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 C20orf78Q9BR46 151 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 IFI27L2Q9H2X8 130 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 EHFQ9NZC4 300 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 C1RLQ9NZP8 487 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 YTHDF2Q9Y5A9 579 aaKnown RBP4.14□□□□□ -1.75
EPHA3-202ENST00000452448 PIKFYVEQ9Y2I7 2098 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 H3BUT2 72 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 ISLRO14498 428 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 CRLF1O75462 422 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 GPX1P07203 203 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 SEC11BP0C7V7 166 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 SLC25A1P53007 311 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 GGTLC2Q14390 218 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 C1QL2Q7Z5L3 287 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 TMEM179BQ7Z7N9 219 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 TP53INP2Q8IXH6 220 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF101Q8IZC7 436 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 TMEM256Q8N2U0 113 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 PGBD5Q8N414 524 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF740Q8NDX6 193 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 OR1L1Q8NH94 360 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 KLK6Q92876 244 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 PGLYRP3Q96LB9 341 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 MLST8Q9BVC4 326 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 SCRT1Q9BWW7 348 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 PRRG4Q9BZD6 226 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 ULBP3Q9BZM4 244 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 POMKQ9H5K3 350 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 MDFICQ9P1T7 246 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 POLR1DQ9Y2S0 133 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 IER3IP1Q9Y5U9 82 aa4.14□□□□□ -1.75
EPHA3-202ENST00000452448 A0A0G2JMZ2 1700 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 FAM236AA0A1B0GUQ0 79 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 FAM236BA0A1B0GV22 79 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TLCD2A6NGC4 264 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 LGALS2P05162 132 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 GYPEP15421 78 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 GABRG2P18507 467 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 CRYBB3P26998 211 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 GPR183P32249 361 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 RPL13AP40429 203 aaKnown RBP4.13□□□□□ -1.75
EPHA3-202ENST00000452448 KRTDAPP60985 99 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 ADIGQ0VDE8 80 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 FOXF1Q12946 379 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 GAGE2BQ13066 116 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TRIP6Q15654 476 aaKnown RBP4.13□□□□□ -1.75
EPHA3-202ENST00000452448 GAGE2EQ4V326 116 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TECRLQ5HYJ1 363 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 PAGE3Q5JUK9 113 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TSPO2Q5TGU0 170 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 STAC2Q6ZMT1 411 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 PIP4P1Q86T03 277 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TRPT1Q86TN4 253 aaKnown RBP4.13□□□□□ -1.75
EPHA3-202ENST00000452448 HOGA1Q86XE5 327 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TGIF2LYQ8IUE0 185 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 PAQR4Q8N4S7 273 aaPredicted RBP4.13□□□□□ -1.75
EPHA3-202ENST00000452448 Q8N976 141 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 CT55Q8WUE5 264 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 RASL10AQ92737 203 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TBL1YQ9BQ87 522 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TMEM59Q9BXS4 323 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 GABARAPL1Q9H0R8 117 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TMEM242Q9NWH2 141 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 GAGE2DQ9UEU5 116 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF835Q9Y2P0 537 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 KLHDC2Q9Y2U9 406 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 RPL36Q9Y3U8 105 aaKnown RBP4.13□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF732B4DXR9 585 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 H3BRM9 83 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TMEM178BH3BS89 294 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 GABARAPH6UMI1 98 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 VCYO14598 125 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 CDC42EP2O14613 210 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 REM1O75628 298 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 C1orf105O95561 183 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 CA2P00918 260 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 IGF1P05019 195 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 HIST1H1DP16402 221 aaKnown RBP4.13□□□□□ -1.75
EPHA3-202ENST00000452448 RPS4Y1P22090 263 aaKnown RBP4.13□□□□□ -1.75
EPHA3-202ENST00000452448 HES1Q14469 280 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 SPHARQ15513 63 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 OR1C1Q15619 314 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 SLC25A35Q3KQZ1 300 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 TRIM40Q6P9F5 258 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 C10orf111Q8N326 155 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 C11orf45Q8TAV5 145 aa4.13□□□□□ -1.75
EPHA3-202ENST00000452448 RTN4IP1Q8WWV3 396 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms