RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 ARPC1BO15143 372 aaKnown RBP13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 RAMP3O60896 148 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 VAMP1P23763 118 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 BTCP35070 178 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 RAG2P55895 527 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 RAB25P57735 213 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 PLET1Q6UQ28 207 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 SLC25A42Q86VD7 318 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 PRIMA1Q86XR5 153 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 FAM71E2Q8N5Q1 922 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 Q8N9W7 124 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 OR4A5Q8NH83 315 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 R3HDM4Q96D70 268 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 GALNT14Q96FL9 552 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 C20orf85Q9H1P6 137 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 FBXL15Q9H469 300 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 BEX1Q9HBH7 125 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 PLSCR3Q9NRY6 295 aa13.17□□□□□ -0.3
CTDSPL-204ENST00000435525 TSPAN9O75954 239 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 OR2A4O95047 310 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 S1PR2O95136 353 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 HLA-DRB1P01911 266 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 OR5AC1P0C628 307 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 HKR1P10072 659 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 IFITM3Q01628 133 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 FOXL1Q12952 345 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 C4orf46Q504U0 113 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 ZNF695Q8IW36 515 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 FOXRED2Q8IWF2 684 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 ADAD2Q8NCV1 583 aaKnown RBP13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 RRNAD1Q96FB5 475 aaKnown RBP13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 RITA1Q96K30 269 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 OR2A7Q96R45 310 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 TMEM222Q9H0R3 208 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 NUDT15Q9NV35 164 aa13.16□□□□□ -0.3
CTDSPL-204ENST00000435525 MARCH11A6NNE9 402 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 SNAPC5O75971 98 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 CNIH1O95406 144 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 UCP1P25874 307 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 CNTFRP26992 372 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 VDAC2P45880 294 aaPredicted RBP13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 AKR1C2P52895 323 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 SP6Q3SY56 376 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 SSX9Q7RTT3 188 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 H2BFWTQ7Z2G1 175 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 SLC35E3Q7Z769 313 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 MMD2Q8IY49 270 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 LGI3Q8N145 548 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 TP53RKQ96S44 253 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 SIGLEC9Q9Y336 463 aa13.15□□□□□ -0.3
CTDSPL-204ENST00000435525 PTTG1O95997 202 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 KRASP01116 189 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 IGLV2-23P01705 113 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 SAA1P0DJI8 122 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 MAS1LP35410 378 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 BRWD1-AS2P59051 145 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 BLCAPP62952 87 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 SRSF2Q01130 221 aaKnown RBP13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 POU2AF1Q16633 256 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 ZNF585BQ52M93 769 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 Q6ZSV7 163 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 CADM3Q8N126 398 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 DUSP18Q8NEJ0 188 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 ABHD5Q8WTS1 349 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 RBPMSQ93062 196 aaKnown RBP13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 IL22RA2Q969J5 263 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 TMEM230Q96A57 120 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 CLCC1Q96S66 551 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 GON7Q9BXV9 100 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 ALX4Q9H161 411 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 C16orf95Q9H693 158 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 FLVCR2Q9UPI3 526 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 MXRA5Q9NR99 2828 aa13.14□□□□□ -0.31
CTDSPL-204ENST00000435525 TRAV6A0A075B6T7 132 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 SRRM4A7MD48 611 aaKnown RBP13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 AP4M1O00189 453 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 KBTBD11O94819 623 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 SFT2D2O95562 160 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 HLA-AP01891 365 aaKnown RBP13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 VSIG10L2P0DP72 767 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 FBLN7Q53RD9 439 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 ZNF562Q6V9R5 426 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 NRARPQ7Z6K4 114 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 FAM219AQ8IW50 185 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 Q8N2B8 174 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 COQ8AQ8NI60 647 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 TMEM167AQ8TBQ9 72 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 CASTOR1Q8WTX7 329 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 GPN1Q9HCN4 374 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 TMEM140Q9NV12 185 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 FKBP11Q9NYL4 201 aa13.13□□□□□ -0.31
CTDSPL-204ENST00000435525 JMJD1CQ15652 2540 aa13.12□□□□□ -0.31
CTDSPL-204ENST00000435525 RBMXL2O75526 392 aaKnown RBP13.12□□□□□ -0.31
CTDSPL-204ENST00000435525 CDS2O95674 445 aa13.12□□□□□ -0.31
CTDSPL-204ENST00000435525 DHFRP00374 187 aa13.12□□□□□ -0.31
CTDSPL-204ENST00000435525 IGHG2P01859 326 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms