RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 OR4S2Q8NH73 311 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 OSR1Q8TAX0 266 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-202ENST00000422544 HSPB9Q9BQS6 159 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 RTBDNQ9BSG5 229 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-202ENST00000422544 SLC2A9Q9NRM0 540 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 TPSG1Q9NRR2 321 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 METTL1Q9UBP6 276 aaKnown RBP7.34□□□□□ -1.23
PDGFC-202ENST00000422544 GPR132Q9UNW8 380 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 MMP24Q9Y5R2 645 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 SPDEFO95238 335 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 IGHG2P01859 326 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 CRYGBP07316 175 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 CTSDP07339 412 aaPredicted RBP7.33□□□□□ -1.24
PDGFC-202ENST00000422544 VSIG10L2P0DP72 767 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 F2RP25116 425 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 CD40LGP29965 261 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 ECI1P42126 302 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 LPAR6P43657 344 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 PROK1P58294 105 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 RND3P61587 244 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 SURF2Q15527 256 aaPredicted RBP7.33□□□□□ -1.24
PDGFC-202ENST00000422544 SLC35E3Q7Z769 313 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 CD300LFQ8TDQ1 290 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 DEDD2Q8WXF8 326 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 ZNF486Q96H40 463 aaPredicted RBP7.33□□□□□ -1.24
PDGFC-202ENST00000422544 NOL4LQ96MY1 436 aaPredicted RBP7.33□□□□□ -1.24
PDGFC-202ENST00000422544 CCDC32Q9BV29 185 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 WDR12Q9GZL7 423 aaKnown RBP7.33□□□□□ -1.24
PDGFC-202ENST00000422544 C5orf66Q9H5L9 145 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 COPZ2Q9P299 210 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 LINC00527Q9UJ94 153 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 C14orf166Q9Y224 244 aaKnown RBP7.33□□□□□ -1.24
PDGFC-202ENST00000422544 VSIG4Q9Y279 399 aa7.33□□□□□ -1.24
PDGFC-202ENST00000422544 IGHV7-81A0A0B4J1V7 117 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 PLA2G10O15496 165 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 RBFOX2O43251 390 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDGFC-202ENST00000422544 S1PR2O95136 353 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 HPRT1P00492 218 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 CA2P00918 260 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 HLA-DRB1P01911 266 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 SAA1P0DJI8 122 aaPredicted RBP7.32□□□□□ -1.24
PDGFC-202ENST00000422544 RPA2P15927 270 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 CCR6P51684 374 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 KRTAP10-3P60369 221 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 UBE2KP61086 200 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 CX3CL1P78423 397 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 SRSF4Q08170 494 aaKnown RBP7.32□□□□□ -1.24
PDGFC-202ENST00000422544 PJVKQ0ZLH3 352 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 SP6Q3SY56 376 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 VMA21Q3ZAQ7 101 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 ZNF585BQ52M93 769 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 SSX9Q7RTT3 188 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 PPP1R27Q86WC6 154 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 KLHDC1Q8N7A1 406 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 C3orf56Q8N813 242 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 CCDC71LQ8N9Z2 235 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 TEX45Q8NA69 505 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 ADAD2Q8NCV1 583 aaKnown RBP7.32□□□□□ -1.24
PDGFC-202ENST00000422544 SCGB3A2Q96PL1 93 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 WNT10AQ9GZT5 417 aa7.32□□□□□ -1.24
PDGFC-202ENST00000422544 TEX13DA0A0J9YY54 714 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-202ENST00000422544 C3orf85A0A1B0GTC6 90 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 NAP1L6A6NFF2 107 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 CENPXA8MT69 81 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 OR2A4O95047 310 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 HRASP01112 189 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 TAS2R31P59538 309 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 GNB1P62873 340 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 FXYD3Q14802 87 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 PRSS8Q16651 343 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 MRGPRG-AS1Q2M3A8 158 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 LINC01559Q495D7 138 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 HIST2H2BDQ6DRA6 164 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 ZNF562Q6V9R5 426 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 CENPVQ7Z7K6 275 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-202ENST00000422544 FOXRED2Q8IWF2 684 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 TCTEX1D1Q8N7M0 179 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 WFDC12Q8WWY7 111 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 RHOVQ96L33 236 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 OR2A7Q96R45 310 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 TP53RKQ96S44 253 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 SLC25A21Q9BQT8 299 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-202ENST00000422544 C7orf50Q9BRJ6 194 aaKnown RBP7.31□□□□□ -1.24
PDGFC-202ENST00000422544 ZNF747Q9BV97 191 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 OR51J1Q9H342 316 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 PLEKHA2Q9HB19 425 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 PARP11Q9NR21 331 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 WSB1Q9Y6I7 421 aa7.31□□□□□ -1.24
PDGFC-202ENST00000422544 CRYM-AS1A6NIL9 109 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 H0Y980 276 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 AP4M1O00189 453 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 ARPC1BO15143 372 aaKnown RBP7.3□□□□□ -1.24
PDGFC-202ENST00000422544 ATP6V0E1O15342 81 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 LYRM1O43325 122 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 UPK1BO75841 260 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 CNIH1O95406 144 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 KRASP01116 189 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 IGKV1-39P01597 117 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 IGKV1D-39P04432 117 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 SERPINE2P07093 398 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms