RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CROCCP3Q8IVE0 287 aa19.44■□□□□ 0.7
VEGFA-208ENST00000417285 BEST4Q8NFU0 473 aa19.44■□□□□ 0.7
VEGFA-208ENST00000417285 A0A087WXM4 84 aa19.43■□□□□ 0.7
VEGFA-208ENST00000417285 IGKV1D-13A0A0B4J2D9 117 aa19.43■□□□□ 0.7
VEGFA-208ENST00000417285 IGKV1-13P0DP09 117 aa19.43■□□□□ 0.7
VEGFA-208ENST00000417285 KLF5Q13887 457 aaPredicted RBP19.43■□□□□ 0.7
VEGFA-208ENST00000417285 IDO2Q6ZQW0 420 aa19.43■□□□□ 0.7
VEGFA-208ENST00000417285 OVCH2Q7RTZ1 564 aa19.43■□□□□ 0.7
VEGFA-208ENST00000417285 ANKRD13BQ86YJ7 626 aa19.43■□□□□ 0.7
VEGFA-208ENST00000417285 HSD17B10Q99714 261 aaKnown RBP19.43■□□□□ 0.7
VEGFA-208ENST00000417285 ANKRD34BA5PLL1 514 aa19.42■□□□□ 0.7
VEGFA-208ENST00000417285 IGLV2-14P01704 120 aa19.42■□□□□ 0.7
VEGFA-208ENST00000417285 CDK10Q15131 360 aa19.42■□□□□ 0.7
VEGFA-208ENST00000417285 TATDN3Q17R31 274 aa19.42■□□□□ 0.7
VEGFA-208ENST00000417285 MRGPRG-AS1Q2M3A8 158 aa19.42■□□□□ 0.7
VEGFA-208ENST00000417285 ACOT12Q8WYK0 555 aa19.42■□□□□ 0.7
VEGFA-208ENST00000417285 COA4Q9NYJ1 87 aa19.42■□□□□ 0.7
VEGFA-208ENST00000417285 PEF1Q9UBV8 284 aaKnown RBP19.42■□□□□ 0.7
VEGFA-208ENST00000417285 AIREO43918 545 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 ACTL6BO94805 426 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 TNFAIP8O95379 198 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 IGLV1-51P01701 117 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 SAA1P0DJI8 122 aaPredicted RBP19.41■□□□□ 0.7
VEGFA-208ENST00000417285 RPL30P62888 115 aaKnown RBP19.41■□□□□ 0.7
VEGFA-208ENST00000417285 OR2B11Q5JQS5 317 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 ZNF343Q6P1L6 599 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 HOGA1Q86XE5 327 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 SBSPONQ8IVN8 264 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 GVQW1Q8N7I0 195 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 TSPAN14Q8NG11 270 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 OR4S2Q8NH73 311 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 TCTEX1D2Q8WW35 142 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 SRSF12Q8WXF0 261 aaKnown RBP19.41■□□□□ 0.7
VEGFA-208ENST00000417285 AUNIPQ9H7T9 357 aa19.41■□□□□ 0.7
VEGFA-208ENST00000417285 MPPED1O15442 326 aa19.4■□□□□ 0.7
VEGFA-208ENST00000417285 OR9G9P0C7N8 305 aa19.4■□□□□ 0.7
VEGFA-208ENST00000417285 CBX5P45973 191 aa19.4■□□□□ 0.7
VEGFA-208ENST00000417285 ZNF66Q6ZN08 573 aa19.4■□□□□ 0.7
VEGFA-208ENST00000417285 MMD2Q8IY49 270 aa19.4■□□□□ 0.7
VEGFA-208ENST00000417285 ZNF430Q9H8G1 570 aaPredicted RBP19.4■□□□□ 0.7
VEGFA-208ENST00000417285 FRMD6-AS1P0C7T7 363 aa19.39■□□□□ 0.69
VEGFA-208ENST00000417285 APELAP0DMC3 54 aa19.39■□□□□ 0.69
VEGFA-208ENST00000417285 ADAD2Q8NCV1 583 aaKnown RBP19.39■□□□□ 0.69
VEGFA-208ENST00000417285 YIPF6Q96EC8 236 aa19.39■□□□□ 0.69
VEGFA-208ENST00000417285 SPIN2AQ99865 258 aa19.39■□□□□ 0.69
VEGFA-208ENST00000417285 SPIN2BQ9BPZ2 258 aa19.39■□□□□ 0.69
VEGFA-208ENST00000417285 RSRP1Q9BUV0 290 aa19.39■□□□□ 0.69
VEGFA-208ENST00000417285 TRIM64CA6NLI5 447 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 C3orf84H3BNL1 204 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 FCGR2CP31995 323 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 TGFBR1P36897 503 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 EIF4EBP1Q13541 118 aaPredicted RBP19.38■□□□□ 0.69
VEGFA-208ENST00000417285 MSMO1Q15800 293 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 MFSD4AQ8N468 514 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 OR9G4Q8NGQ1 327 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 VSTM2AQ8TAG5 236 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 SECTM1Q8WVN6 248 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 SNAPC3Q92966 411 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 S100A16Q96FQ6 103 aaKnown RBP19.38■□□□□ 0.69
VEGFA-208ENST00000417285 TAS2R8Q9NYW2 309 aa19.38■□□□□ 0.69
VEGFA-208ENST00000417285 TNCP24821 2201 aa19.37■□□□□ 0.69
VEGFA-208ENST00000417285 H0Y980 276 aa19.37■□□□□ 0.69
VEGFA-208ENST00000417285 XRCC3O43542 346 aa19.37■□□□□ 0.69
VEGFA-208ENST00000417285 DYRK1AQ13627 763 aa19.37■□□□□ 0.69
VEGFA-208ENST00000417285 UBE2NLQ5JXB2 153 aa19.37■□□□□ 0.69
VEGFA-208ENST00000417285 OR13F1Q8NGS4 319 aa19.37■□□□□ 0.69
VEGFA-208ENST00000417285 FAM223BA6NKX1 122 aa19.36■□□□□ 0.69
VEGFA-208ENST00000417285 PPYP01298 95 aa19.36■□□□□ 0.69
VEGFA-208ENST00000417285 RPS19P39019 145 aaKnown RBP19.36■□□□□ 0.69
VEGFA-208ENST00000417285 KIR2DS2P43631 304 aa19.36■□□□□ 0.69
VEGFA-208ENST00000417285 SYNJ2BPP57105 145 aa19.36■□□□□ 0.69
VEGFA-208ENST00000417285 LSM3P62310 102 aaKnown RBP19.36■□□□□ 0.69
VEGFA-208ENST00000417285 FAM223AQ8IWN6 122 aa19.36■□□□□ 0.69
VEGFA-208ENST00000417285 ZBTB34Q8NCN2 500 aa19.36■□□□□ 0.69
VEGFA-208ENST00000417285 ZMAT4Q9H898 229 aa19.36■□□□□ 0.69
VEGFA-208ENST00000417285 SIGLEC8Q9NYZ4 499 aa19.36■□□□□ 0.69
VEGFA-208ENST00000417285 OR2A4O95047 310 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 PTHLHP12272 177 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 DEFA5Q01523 94 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 ATP5G2Q06055 141 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 IL34Q6ZMJ4 242 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 SLC25A42Q86VD7 318 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 VKORC1L1Q8N0U8 176 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 Q8N1Y9 231 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 TTC9CQ8N5M4 171 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 OR5AP2Q8NGF4 316 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 RCHY1Q96PM5 261 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 OR2A7Q96R45 310 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 IFT46Q9NQC8 304 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 CCL28Q9NRJ3 127 aa19.35■□□□□ 0.69
VEGFA-208ENST00000417285 A8MZ25 164 aa19.34■□□□□ 0.69
VEGFA-208ENST00000417285 KBTBD11O94819 623 aa19.34■□□□□ 0.69
VEGFA-208ENST00000417285 FCER2P06734 321 aa19.34■□□□□ 0.69
VEGFA-208ENST00000417285 RHOGP84095 191 aa19.34■□□□□ 0.69
VEGFA-208ENST00000417285 RPEL1Q2QD12 228 aa19.34■□□□□ 0.69
VEGFA-208ENST00000417285 FAM209BQ5JX69 171 aa19.34■□□□□ 0.69
VEGFA-208ENST00000417285 SGPP2Q8IWX5 399 aa19.34■□□□□ 0.69
VEGFA-208ENST00000417285 TRBV9A0A0B4J1U6 114 aa19.33■□□□□ 0.68
VEGFA-208ENST00000417285 TNFSF12O43508 249 aa19.33■□□□□ 0.68
VEGFA-208ENST00000417285 HRASP01112 189 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms